EST details — SGN-E280562
| Search information |
| Request: 280562 | Match: SGN-E280562 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72269 | Clone name: cLER-1-K4 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178610 is on microarray TOM1: SGN-S1-1-1.2.4.19
This clone has been mapped as cLER-1-K4.
| Additional sequencing |
| Clone: SGN-C178610 [TUS-29-J16] | Trace: SGN-T184210 | EST: SGN-E371443 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178610 [TUS-29-J16] | Trace: SGN-T184211 | EST: SGN-E371444 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280562 | Length: 607 bp (963 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E280562 [] (trimmed)
TGATGATGAAGAGTTGCTTGAGCTTGTTGAGCTGGAGGTAAGAGAGTTATTGTCAAGTTATGAGTTTCCTGGTGATGATATTCCTATTCATTGTG
GGTCTGCCCTTTTGGCTTTAGAGGCTTTAATGGCTAATCCTACTATTAAAAGGGGTGATGATCAATGGGTTGATAAGATTTATAAATTGATGGAC
TCTGTTGATGAATATATTCCTATTCCACAAAGACAAACTGAATTACCTTTCTTGATGGCTATTGAAGATGTGTTTTCTATTACTGGTAGAGGTAC
AGTGGCTACAGGGAGAGTGGAAAGAGGGACTGTTAAGACAGGGGAAATTGTTGATATAGTTGGATTGAAGGACACTAGGAACACTACAGTAACAG
GAGTTGAGATGTTTCAGAAGATATTGGATGAAGCAATGGCAGGAGATAATGTGGGGTTGTTGTTGAGAGGTATTCAAAAGATCGATATTCAAAGA
GGAATGGTGTTGGCAAAACCTGGATCAATTACTCCACACACCAAGTTTGAAGCTTTGGTGTATGTGTTGAAGAAGGAAGAGGGTGGCAGGCATTC
CCCTTTCTTTGCTGGTTATAGGCCACAGTTTTACATG
GGTCTGCCCTTTTGGCTTTAGAGGCTTTAATGGCTAATCCTACTATTAAAAGGGGTGATGATCAATGGGTTGATAAGATTTATAAATTGATGGAC
TCTGTTGATGAATATATTCCTATTCCACAAAGACAAACTGAATTACCTTTCTTGATGGCTATTGAAGATGTGTTTTCTATTACTGGTAGAGGTAC
AGTGGCTACAGGGAGAGTGGAAAGAGGGACTGTTAAGACAGGGGAAATTGTTGATATAGTTGGATTGAAGGACACTAGGAACACTACAGTAACAG
GAGTTGAGATGTTTCAGAAGATATTGGATGAAGCAATGGCAGGAGATAATGTGGGGTTGTTGTTGAGAGGTATTCAAAAGATCGATATTCAAAGA
GGAATGGTGTTGGCAAAACCTGGATCAATTACTCCACACACCAAGTTTGAAGCTTTGGTGTATGTGTTGAAGAAGGAAGAGGGTGGCAGGCATTC
CCCTTTCTTTGCTGGTTATAGGCCACAGTTTTACATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280562] | SGN-U577523 | Tomato 200607 | Build 2 | 62 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92116 [Download] [View] | Facility Assigned ID: TPRAB62TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.938 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |
Working
