EST details — SGN-E282616

Search information 
Request: 282616Match: SGN-E282616
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C70714Clone name: cLER-15-K3
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178796 is on microarray TOM1: SGN-S1-1-7.2.3.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178796 [TUS-30-B10] Trace: SGN-T184824 EST: SGN-E372032 Direction: 3' Facility: INRA
Clone: SGN-C178796 [TUS-30-B10] Trace: SGN-T184825 EST: SGN-E372033 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E282616Length: 438 bp (781 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E282616 [] (trimmed) AAAGATGGCGGTAATGGGGAAATTGAGAATGTTCGTGGTTCAAGAACCAGTCGTGGCTGCCTCTTGTCTCATCGCTGGATTCGGCCTCTTCCTTC
CTGCGGTTGTAAGGCCTATTCTGGACTCTTTTGAATCATCCAAGCAAGTTCCGGCAGCTCCTTTAAGCGATGTGGTTGCGGGTATGACTGGTAAA
AAACAAGGATAAGATACTTGTGAGGTTTTAGTTTCAACCAACTCCTTGTAGGCTTATTCCATCCTTCTTGTTTCATCCTGATCAGAAGTGAAAAT
AATGTCTTCTTTTGTGGATACTTTAAATGTTTTGTGCAAGGGGAGGGAGACCCTCCTCATTTGTAAACACTTGACAGAGGCAGTGCTACTTGTAT
TCAAATACCGAATTGACTTCAGTTATAACCTAATCAAATGCATCTGAGGCTTGTCATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E282616] SGN-U574538 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T95136 [Download] [View] Facility Assigned ID: TPRCE62THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0082 Quality Trim Threshold: 12.5