EST details — SGN-E284730
| Search information |
| Request: 284730 | Match: SGN-E284730 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77752 | Clone name: cLES-3-C5 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C190157 [TUS-59-K19] | Trace: SGN-T340625 | EST: SGN-E539750 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C190157 [TUS-59-K19] | Trace: SGN-T340627 | EST: SGN-E539752 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E284730 | Length: 313 bp (781 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E284730 [] (trimmed)
CCATGGATTCACTTCGCTCAATCGCAATCTCAATCTGCACTCTTGTCAACCTGCAGTGTGCCCCGACTGCCGACGTTCACGGTATCACCTTCCGG
TTACCGGCAAGCTCATTTTCGTTCACGGCGCGGCACTTAAATCACGTGAAAGTCCATTACCGTTAGATCAATCAGAGGGCGACAGCGATTCCGAT
GAAAAAACAAGGAAGAGTCGCAACGAGAAGAAGCGTGAAGCTCGACGCGCCGTCCGGTGGGCTATGGATTTAGCTAAGATCTCTGCTCCTCAAAT
TAAGCGCATTCTCAGAGTGGCTTCAACG
TTACCGGCAAGCTCATTTTCGTTCACGGCGCGGCACTTAAATCACGTGAAAGTCCATTACCGTTAGATCAATCAGAGGGCGACAGCGATTCCGAT
GAAAAAACAAGGAAGAGTCGCAACGAGAAGAAGCGTGAAGCTCGACGCGCCGTCCGGTGGGCTATGGATTTAGCTAAGATCTCTGCTCCTCAAAT
TAAGCGCATTCTCAGAGTGGCTTCAACG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E284730] | SGN-U570482 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T97751 [Download] [View] | Facility Assigned ID: TPSAI15TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0204 | Quality Trim Threshold: 14.5 |
Working
