EST details — SGN-E285502
Search information |
Request: 285502 | Match: SGN-E285502 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C74560 | Clone name: cLES-10-G3 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C190351 [TUS-60-C21] | Trace: SGN-T340958 | EST: SGN-E540083 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C190351 [TUS-60-C21] | Trace: SGN-T340961 | EST: SGN-E540086 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E285502 | Length: 415 bp (844 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285502 [] (trimmed)
CGCCGCCCCTATTCTCCAGCAAAGTTTGAACAAAAGAAGCTTCAATTGAATTCAGAAAATGAACATGCCTTTCATTAGTCCAATACAAACTGTTA
CTCGACGATTCGTATTTTCCTTCAAAATCCCTGAAGTACATGACATGAGATTTTCTGAAGGGCATTCAAAAGAGATCATTCTTGGTTCTAATGAA
CTCACCAGCATTTTGCTATGTTACAGATTTATTAAAATCTTGTGAATGGGTCACTATGCTCTATGCTAATATATCATTGGACTTTCTTTCTTATT
TATTTGAATATAATAATCTTGAAATAACCGATTTCATATTTAATAAGTATAAATCAGTAGGGAGGAGGGAGCTTCAAGCTTAAGGGTCATCACTC
ATTTTCTTATGTCTTCTTATTGGGTTTGGTATTAA
CTCGACGATTCGTATTTTCCTTCAAAATCCCTGAAGTACATGACATGAGATTTTCTGAAGGGCATTCAAAAGAGATCATTCTTGGTTCTAATGAA
CTCACCAGCATTTTGCTATGTTACAGATTTATTAAAATCTTGTGAATGGGTCACTATGCTCTATGCTAATATATCATTGGACTTTCTTTCTTATT
TATTTGAATATAATAATCTTGAAATAACCGATTTCATATTTAATAAGTATAAATCAGTAGGGAGGAGGGAGCTTCAAGCTTAAGGGTCATCACTC
ATTTTCTTATGTCTTCTTATTGGGTTTGGTATTAA
Unigenes |
Current Unigene builds | |||||
[SGN-E285502] | SGN-U566723 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T99642 [Download] [View] | Facility Assigned ID: TPSBK38TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.950 | Expected Error Rate: 0.0131 | Quality Trim Threshold: 14.5 |