EST details — SGN-E285603
| Search information |
| Request: 285603 | Match: SGN-E285603 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78277 | Clone name: cLES-5-C24 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178939 is on microarray TOM1: SGN-S1-1-8.4.3.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178939 [TUS-30-H9] | Trace: SGN-T184681 | EST: SGN-E372241 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178939 [TUS-30-H9] | Trace: SGN-T184682 | EST: SGN-E372242 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E285603 | Length: 500 bp (741 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285603 [] (trimmed)
GTTAAACCATTAATAATAGCGGTTTAACGAATTTCATGGAGAACAGTAGTAACAAAGAGACGGCGATGAGACTTAGAGAGGTGGCCGAAGGAGCA
GTAAAGGCGATTGGGTTAGGGTTTGATATAGTGGATGATTTGAGGTTGAAGTTTTGTAAGGATTATCAGTTGATCTCTGTTGACCATGATCAGGT
GCGAGACATTTCAATTCCTGGTGGAATTTTGGTTCAAAATGTTCCCAAATCTATCAATTGCGATAAAGGCGAACGCATGAGATTTACTTCTGATA
TTCTCTCTTTCTCCCAGATGTCCGAGCGATTTAATCAGGACCTATCCCTTTCTGGTAAGATTCCATCGGGCCATTTCAATGCTGCTTTTGAATAT
ACCACTTGTTGGCAAAAAGACGCTGCCTACACGAAAGCTCTTGCTTTTGATGGGGTCTTCATAACACTCTATAACATTGCATTAGAGAAGGCTCA
AGTTGTACTGCGTGATCATGTTAAA
GTAAAGGCGATTGGGTTAGGGTTTGATATAGTGGATGATTTGAGGTTGAAGTTTTGTAAGGATTATCAGTTGATCTCTGTTGACCATGATCAGGT
GCGAGACATTTCAATTCCTGGTGGAATTTTGGTTCAAAATGTTCCCAAATCTATCAATTGCGATAAAGGCGAACGCATGAGATTTACTTCTGATA
TTCTCTCTTTCTCCCAGATGTCCGAGCGATTTAATCAGGACCTATCCCTTTCTGGTAAGATTCCATCGGGCCATTTCAATGCTGCTTTTGAATAT
ACCACTTGTTGGCAAAAAGACGCTGCCTACACGAAAGCTCTTGCTTTTGATGGGGTCTTCATAACACTCTATAACATTGCATTAGAGAAGGCTCA
AGTTGTACTGCGTGATCATGTTAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E285603] | SGN-U566243 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98086 [Download] [View] | Facility Assigned ID: TPSAR24TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0090 | Quality Trim Threshold: 14.5 |
Working
