EST details — SGN-E285964
Search information |
Request: 285964 | Match: SGN-E285964 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C75229 | Clone name: cLES-13-F11 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184360 is on microarray TOM1: SGN-S1-1-3.2.16.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C184360 [TUS-44-J6] | Trace: SGN-T198406 | EST: SGN-E397080 | Direction: 3' | Facility: INRA |
Clone: SGN-C184360 [TUS-44-J6] | Trace: SGN-T198407 | EST: SGN-E397081 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E285964 | Length: 254 bp (676 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285964 [] (trimmed)
ATATTGGGTCTGCTCTCCTTGTTGCAAGATGAGAAATTGGGTAATGAGCAGCGGCTTCTTGTGGATTCAATGGTTAAAACCAGTAATGTCGTGTC
AACCCTAATAGATGATGTGATGGATACTTCAACAAAGGACAACGGTAGATTCCCTTTGGAGATGAGATATTTTCAGCTACATTCCATGATAAAAG
AAGCTGCTTGTCTTGCCAAGTGTTTGTGTGCTTATAGGGGTTATAATATTTCCATTGAGGGTGA
AACCCTAATAGATGATGTGATGGATACTTCAACAAAGGACAACGGTAGATTCCCTTTGGAGATGAGATATTTTCAGCTACATTCCATGATAAAAG
AAGCTGCTTGTCTTGCCAAGTGTTTGTGTGCTTATAGGGGTTATAATATTTCCATTGAGGGTGA
Unigenes |
Current Unigene builds | |||||
[SGN-E285964] | SGN-U581695 | Tomato 200607 | Build 2 | 44 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T100277 [Download] [View] | Facility Assigned ID: TPSBY30TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.951 | Expected Error Rate: 0.0117 | Quality Trim Threshold: 14.5 |