EST details — SGN-E286636
| Search information |
| Request: 286636 | Match: SGN-E286636 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C74950 | Clone name: cLES-12-D19 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185517 is on microarray TOM1: SGN-S1-1-6.2.9.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185517 [TUS-47-J11] | Trace: SGN-T192348 | EST: SGN-E391022 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185517 [TUS-47-J11] | Trace: SGN-T192349 | EST: SGN-E391023 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286636 | Length: 579 bp (780 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286636 [] (trimmed)
TTAGAATCAGCAATTTATTATAATTGTCTTATATAGTCCTATAAATTTGTCAAACTTGAATCAACATTTTCATAAGCAACCTCAAATCATCCAAA
ATGGGTCTTCAAACTGATATGTACCCTTCAAATGGCTTCAAGCAGCAGCTTAGCTACTATGACGATAACGACTACTATTCATCGGAGGATAATTA
TTACAGCAACAATGGCTCAAGCATGCAAATGAAGAAGCCTTATGGTTATCCCACCTCTAGTCCAACCCAAAATCATCACATGATGATGAGCCATG
GCGGCTATAGCCACGATGACAAGTACCAATATGGGCATATGTCTCATGATTCTGCTAATAGTTCCAGCTATGGATCAAGTGGTTTTCAACACACT
TCCAACATGAATGGTGGCTATGGATCAAGTGGAATGCAACACTCTTCCCACGCGAATGCTGGCTATGGAAGTGCGATGTATGGAAGTGCAATGCA
ACAATCTTCCCACATTAACGGTGGCTATGGAAGCGGAATGCAGCATGCTTCCCACATGAGTGGTGGCTATGGAAAGCGAATGCAACATACATCCA
ACATGACTG
ATGGGTCTTCAAACTGATATGTACCCTTCAAATGGCTTCAAGCAGCAGCTTAGCTACTATGACGATAACGACTACTATTCATCGGAGGATAATTA
TTACAGCAACAATGGCTCAAGCATGCAAATGAAGAAGCCTTATGGTTATCCCACCTCTAGTCCAACCCAAAATCATCACATGATGATGAGCCATG
GCGGCTATAGCCACGATGACAAGTACCAATATGGGCATATGTCTCATGATTCTGCTAATAGTTCCAGCTATGGATCAAGTGGTTTTCAACACACT
TCCAACATGAATGGTGGCTATGGATCAAGTGGAATGCAACACTCTTCCCACGCGAATGCTGGCTATGGAAGTGCGATGTATGGAAGTGCAATGCA
ACAATCTTCCCACATTAACGGTGGCTATGGAAGCGGAATGCAGCATGCTTCCCACATGAGTGGTGGCTATGGAAAGCGAATGCAACATACATCCA
ACATGACTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286636] | SGN-U582655 | Tomato 200607 | Build 2 | 52 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T100167 [Download] [View] | Facility Assigned ID: TPSBU22TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0088 | Quality Trim Threshold: 14.5 |
Working
