EST details — SGN-E287127
| Search information |
| Request: 287127 | Match: SGN-E287127 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78629 | Clone name: cLES-6-E18 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185468 is on microarray TOM1: SGN-S1-1-7.4.9.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185468 [TUS-47-H10] | Trace: SGN-T192481 | EST: SGN-E391155 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185468 [TUS-47-H10] | Trace: SGN-T192482 | EST: SGN-E391156 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287127 | Length: 662 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287127 [] (trimmed)
TTTCGCAGCTTCACAGCTCCTTCAGATCAGTAAAAATGCCGTTCAAGAGGTTTGTGGAGATCGGAAGAGTTGCACTCGTTAACTACGGGGAGGAC
TATGGGAGGCTCGTCGTCATTGTTGACGTTATCGACCAAAACAGGGCTCTTGTTGATGCTCCTGACATGGTGAGGAGCCAGATGAACTTCAAGAG
GCTTTCCCTCACAGATGTCAAGATCGACATCAAGAGAATTCCAAAGAAGAAGACCCTGATTGCTGCTATGGAGGCTGCTGATGTGAAGACCAAGT
GGGAGTCCAGCTCCTGGGGAAGGAAGTTGATCGTGCAGAAGAGGAGGGCCTCACTCAACGATTTTGATAGGTTTAAGCTCATGTTGGCAAAGATT
AAGAGGGCTGGTGTGGTGAGACAGGAGCTTGCAAAGCTTAAAAAGGAGGTTGCAGCTTAAGAACTTTTTCAAGTAGTGAAACATTGATTCAAAGC
AATTTTGGAAGTTGTATTTTTACTTTTGGGAATATATTTATCTTTTTTTTTTTTAATTCGCCTTTCCATTTTTGCTTGTTTTAGACTTTGCTGGG
AAATTATTTTTCTGATCTATGAATGGTGAACTGTTTGTTTCAAAGAATGCTTGTCTACCTACACTATCAAAACTCTCTTTCATTTGAAAAAA
TATGGGAGGCTCGTCGTCATTGTTGACGTTATCGACCAAAACAGGGCTCTTGTTGATGCTCCTGACATGGTGAGGAGCCAGATGAACTTCAAGAG
GCTTTCCCTCACAGATGTCAAGATCGACATCAAGAGAATTCCAAAGAAGAAGACCCTGATTGCTGCTATGGAGGCTGCTGATGTGAAGACCAAGT
GGGAGTCCAGCTCCTGGGGAAGGAAGTTGATCGTGCAGAAGAGGAGGGCCTCACTCAACGATTTTGATAGGTTTAAGCTCATGTTGGCAAAGATT
AAGAGGGCTGGTGTGGTGAGACAGGAGCTTGCAAAGCTTAAAAAGGAGGTTGCAGCTTAAGAACTTTTTCAAGTAGTGAAACATTGATTCAAAGC
AATTTTGGAAGTTGTATTTTTACTTTTGGGAATATATTTATCTTTTTTTTTTTTAATTCGCCTTTCCATTTTTGCTTGTTTTAGACTTTGCTGGG
AAATTATTTTTCTGATCTATGAATGGTGAACTGTTTGTTTCAAAGAATGCTTGTCTACCTACACTATCAAAACTCTCTTTCATTTGAAAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287127] | SGN-U580607 | Tomato 200607 | Build 2 | 42 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98579 [Download] [View] | Facility Assigned ID: TPSAV33THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0046 | Quality Trim Threshold: 12.5 |
Working
