EST details — SGN-E289210
| Search information |
| Request: 289210 | Match: SGN-E289210 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C76464 | Clone name: cLES-18-C1 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184424 is on microarray TOM1: SGN-S1-1-3.4.16.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184424 [TUS-44-L22] | Trace: SGN-T198434 | EST: SGN-E397108 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184424 [TUS-44-L22] | Trace: SGN-T198435 | EST: SGN-E397109 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289210 | Length: 469 bp (856 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289210 [] (trimmed)
TGGAAATTCACCTTACATCAACTGTTTACCGTCACTTCACCACCACACACTTGGTTCAAGAGACAAGTTCTTGATCTTATCATCCGATGGGCTCT
ACCAATACTTCACCAACGAAGAAGCAGTCTCCGAAGTAGAGACCTTTTTGTCTATATTCCCCGAGGGAGATCCTGCACAACATCTTGTCGAAGAA
GTCTTATTCAGAGCTGCTAAGAAAGCTGGCTTGAACTTTCACGAGTTGCTTGATATACCTCAAGGTGATCGTAGGAAGTTCCATGATGATGATTC
AATCATCATTTTATCCTTCGAAGGAAGGATATGGAAATCATCTATGTAAATCTCACGTCTATCGAGGAATTTTGGAAGTATACCCTCAAGACCAC
ATCATCAGTACATACAAGAATTCGAGCTTGTTATGCTTTGTTAGCCCCTACTCTACCCCGAATTTAGCACCTGTTGCGGATAGTATACA
ACCAATACTTCACCAACGAAGAAGCAGTCTCCGAAGTAGAGACCTTTTTGTCTATATTCCCCGAGGGAGATCCTGCACAACATCTTGTCGAAGAA
GTCTTATTCAGAGCTGCTAAGAAAGCTGGCTTGAACTTTCACGAGTTGCTTGATATACCTCAAGGTGATCGTAGGAAGTTCCATGATGATGATTC
AATCATCATTTTATCCTTCGAAGGAAGGATATGGAAATCATCTATGTAAATCTCACGTCTATCGAGGAATTTTGGAAGTATACCCTCAAGACCAC
ATCATCAGTACATACAAGAATTCGAGCTTGTTATGCTTTGTTAGCCCCTACTCTACCCCGAATTTAGCACCTGTTGCGGATAGTATACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289210] | SGN-U588286 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101652 [Download] [View] | Facility Assigned ID: TPSCQ13TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0135 | Quality Trim Threshold: 12.5 |
Working
