EST details — SGN-E289867
| Search information |
| Request: 289867 | Match: SGN-E289867 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C88823 | Clone name: cLET-9-L22 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184849 is on microarray TOM1: SGN-S1-1-2.2.14.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184849 [TUS-45-N15] | Trace: SGN-T200051 | EST: SGN-E398725 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289867 | Length: 323 bp (731 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E289867 [] (trimmed)
TTGTAATACAACCAACCACCAAAGTTCATTACAATACTCGACAACATATAAGTACTCCAACAAACAAAAATACAAAATAAAAGAGACAACATATT
ATAAAATGATGGATTAAACTCGATCGATCGATAGATATCCGTCTTATTTTTCCCCAATTATGCCTTGGAAAATTGAACTTTCATCAACCTTACTG
AACCTTCGAGCAGTCAGTAAAAGGGCTGATCTTGTAAGGAATGCTTACGCCACAAGCACTAGGTATACCAGCGGCTTTGCCTAGATTAAGGCCTT
TAATAGCATTAGCAGCTGATTTGAGGCAAGTGCATGCT
ATAAAATGATGGATTAAACTCGATCGATCGATAGATATCCGTCTTATTTTTCCCCAATTATGCCTTGGAAAATTGAACTTTCATCAACCTTACTG
AACCTTCGAGCAGTCAGTAAAAGGGCTGATCTTGTAAGGAATGCTTACGCCACAAGCACTAGGTATACCAGCGGCTTTGCCTAGATTAAGGCCTT
TAATAGCATTAGCAGCTGATTTGAGGCAAGTGCATGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289867] | SGN-U579687 | Tomato 200607 | Build 2 | 127 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T104682 [Download] [View] | Facility Assigned ID: TMEBJ71TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |
Working
