EST details — SGN-E290401

Search information 
Request: 290401Match: SGN-E290401
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C77143Clone name: cLES-20-B17
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C179239 is on microarray TOM1: SGN-S1-1-4.4.2.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179239 [TUS-31-D21] Trace: SGN-T185372 EST: SGN-E373234 Direction: 3' Facility: INRA
Clone: SGN-C179239 [TUS-31-D21] Trace: SGN-T185373 EST: SGN-E373235 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E290401Length: 356 bp (1021 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E290401 [] (trimmed) GCATTTTCCCCTGCACTTTCTCACACTACGCATCAGCCTCGCTCTCTTCTCGGAATAGCATCAAGGATAGTTCATCAAAGTTCAGGTTCTTCATT
CAATGGCCAACGATTGTGCCTATCCCGTTCGCGTTTTGCTACCGATATCCAAAACAAGAAAATGTCCAGACTATGTATAGTGATGGTTCAACCAA
AAATTCAGTTCATACAAGGAACTGATGAGCAAACAATACCAGATGTGAAACTAACAAAGTCAAGGGATGGAACAAATGGTATGGCTATATTCAGG
TTTGATCAACCCTCCGTATTTGATTCATCTGGTGAAGTAGGGGATATCACTGGATTCTACATGATTGACGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E290401] SGN-U562929 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T102080 [Download] [View] Facility Assigned ID: TPSDA09TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0111 Quality Trim Threshold: 14.5