EST details — SGN-E290460
| Search information |
| Request: 290460 | Match: SGN-E290460 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77328 | Clone name: cLES-20-J4 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179316 is on microarray TOM1: SGN-S1-1-7.4.2.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179316 [TUS-31-H2] | Trace: SGN-T185562 | EST: SGN-E373424 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179316 [TUS-31-H2] | Trace: SGN-T185563 | EST: SGN-E373425 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290460 | Length: 648 bp (867 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290460 [] (trimmed)
TCGTTTCAGAAAGAGAAAAAAAGAAAGAAAATGGTCACATTGTCATCCTTGTGTAAACATTCAGAGGACTGAACCCTAAACTTGCCGACTCACAC
GAGTAAAAACAACCCTCGTTTTCCATGGGCACAGTTCTCAAGCTTTGTTTTTTGTGTCTACAATTAATCTCTGTGCATTGCCATGGAAGGATACT
CAAGGATGATAACTCTTCATCTGATCAGTTCAAAAACAGGTTTCAAAGGATTTTTCTGAGTATACTTTTTGGTATGTTTACAGGTTTGATTTGTG
CACTTGTTTTTGCTTGGCTTGTTCGGAGTTTTGTTCGTTACATTAACAAAGCCCCAATTCTTAAAGGCCCTGTTGTATTTTCTCCTAAAATTCCA
CCTAAAACTCTGCAATCAGCTCTTGATAATGATACCCAGTTGATTGGGTCAAGTAATTCTGGAAAATATTTCAGAACTGTTCTTGATAATGGGCT
TACTGTTGCTGTTAAGAGAATGGAACCTGGTTCTCCGCAGTTACATACTAAGTCATTTAAGAGAAGAATACAACATGAACTTGAACTTATTGCTG
GTTTAAGGCATAGGAATTTGATGAGTTTAAGGGCGTATGTTCGTGAATCGAATACGTTCTTTTTGGTTTATGATTATG
GAGTAAAAACAACCCTCGTTTTCCATGGGCACAGTTCTCAAGCTTTGTTTTTTGTGTCTACAATTAATCTCTGTGCATTGCCATGGAAGGATACT
CAAGGATGATAACTCTTCATCTGATCAGTTCAAAAACAGGTTTCAAAGGATTTTTCTGAGTATACTTTTTGGTATGTTTACAGGTTTGATTTGTG
CACTTGTTTTTGCTTGGCTTGTTCGGAGTTTTGTTCGTTACATTAACAAAGCCCCAATTCTTAAAGGCCCTGTTGTATTTTCTCCTAAAATTCCA
CCTAAAACTCTGCAATCAGCTCTTGATAATGATACCCAGTTGATTGGGTCAAGTAATTCTGGAAAATATTTCAGAACTGTTCTTGATAATGGGCT
TACTGTTGCTGTTAAGAGAATGGAACCTGGTTCTCCGCAGTTACATACTAAGTCATTTAAGAGAAGAATACAACATGAACTTGAACTTATTGCTG
GTTTAAGGCATAGGAATTTGATGAGTTTAAGGGCGTATGTTCGTGAATCGAATACGTTCTTTTTGGTTTATGATTATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290460] | SGN-U570675 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102139 [Download] [View] | Facility Assigned ID: TPSDB50TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 14.5 |
Working
