EST details — SGN-E290886
| Search information |
| Request: 290886 | Match: SGN-E290886 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C79948 | Clone name: cLET-10-L3 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C182055 is on microarray TOM1: SGN-S1-1-4.2.10.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C182055 [TUS-38-J5] | Trace: SGN-T194711 | EST: SGN-E393385 | Direction: 3' | Facility: INRA |
| Clone: SGN-C182055 [TUS-38-J5] | Trace: SGN-T199328 | EST: SGN-E398002 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290886 | Length: 632 bp (875 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290886 [] (trimmed)
TTCCAGGAACTCAGAAGTAAAATACGTGCATAAGAAGCAGTCTGGTGGTTCAGGACAGTTTGCTGATATCACAGTAAGGTTTGAACCCATGGAAG
CAGGTGGTGGATATGAATTCAAGAGTGAAATCAAGGGAGGTGCAGTGCCAAAAGAATATATCCCTGGTGTTATGAAGGGATTAGAAGAATGCATG
AGTAACGGAGTACTGGCAGGCTTTCCAGTTGTTGATGTTCGTGCTGTGCTAGTAGATGGATCTTACCATGATGTGGATTCAAGTGTTTTGGCATT
CCAGCTGGCTGCTCGGGGAGCTTTTAGGGAAGGGATGAGAAAAGCTGGTCCACAATTGCTAGAACCCATAATGAAGGTTGAAGTAGTTACACCAG
AAGAACATCTAGGGGATGTGATTGGTGACCTTAACTCAAGGAGAGGCCAGATCAACAGCTTTGGAGACAAGCCTGGAGGTCTCAAGGTGGTGGAT
TCTTTAGTTCCATTAGCAGAGATGTTCAATTACGTTAGTACCTTGCGAGGAATGACAAAGGGGCGTGCATCGTATGTTATGCAGTTAGCCAAATT
TGACGTTGTCCCTCAACACATTCAAAACCAGCTTGCCAAAAAGGAGGAAGCAGCTGCTGCTT
CAGGTGGTGGATATGAATTCAAGAGTGAAATCAAGGGAGGTGCAGTGCCAAAAGAATATATCCCTGGTGTTATGAAGGGATTAGAAGAATGCATG
AGTAACGGAGTACTGGCAGGCTTTCCAGTTGTTGATGTTCGTGCTGTGCTAGTAGATGGATCTTACCATGATGTGGATTCAAGTGTTTTGGCATT
CCAGCTGGCTGCTCGGGGAGCTTTTAGGGAAGGGATGAGAAAAGCTGGTCCACAATTGCTAGAACCCATAATGAAGGTTGAAGTAGTTACACCAG
AAGAACATCTAGGGGATGTGATTGGTGACCTTAACTCAAGGAGAGGCCAGATCAACAGCTTTGGAGACAAGCCTGGAGGTCTCAAGGTGGTGGAT
TCTTTAGTTCCATTAGCAGAGATGTTCAATTACGTTAGTACCTTGCGAGGAATGACAAAGGGGCGTGCATCGTATGTTATGCAGTTAGCCAAATT
TGACGTTGTCCCTCAACACATTCAAAACCAGCTTGCCAAAAAGGAGGAAGCAGCTGCTGCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290886] | SGN-U579489 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105055 [Download] [View] | Facility Assigned ID: TMEBM62TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 14.5 |
Working
