EST details — SGN-E290886
Search information |
Request: 290886 | Match: SGN-E290886 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C79948 | Clone name: cLET-10-L3 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C182055 is on microarray TOM1: SGN-S1-1-4.2.10.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C182055 [TUS-38-J5] | Trace: SGN-T194711 | EST: SGN-E393385 | Direction: 3' | Facility: INRA |
Clone: SGN-C182055 [TUS-38-J5] | Trace: SGN-T199328 | EST: SGN-E398002 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E290886 | Length: 632 bp (875 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290886 [] (trimmed)
TTCCAGGAACTCAGAAGTAAAATACGTGCATAAGAAGCAGTCTGGTGGTTCAGGACAGTTTGCTGATATCACAGTAAGGTTTGAACCCATGGAAG
CAGGTGGTGGATATGAATTCAAGAGTGAAATCAAGGGAGGTGCAGTGCCAAAAGAATATATCCCTGGTGTTATGAAGGGATTAGAAGAATGCATG
AGTAACGGAGTACTGGCAGGCTTTCCAGTTGTTGATGTTCGTGCTGTGCTAGTAGATGGATCTTACCATGATGTGGATTCAAGTGTTTTGGCATT
CCAGCTGGCTGCTCGGGGAGCTTTTAGGGAAGGGATGAGAAAAGCTGGTCCACAATTGCTAGAACCCATAATGAAGGTTGAAGTAGTTACACCAG
AAGAACATCTAGGGGATGTGATTGGTGACCTTAACTCAAGGAGAGGCCAGATCAACAGCTTTGGAGACAAGCCTGGAGGTCTCAAGGTGGTGGAT
TCTTTAGTTCCATTAGCAGAGATGTTCAATTACGTTAGTACCTTGCGAGGAATGACAAAGGGGCGTGCATCGTATGTTATGCAGTTAGCCAAATT
TGACGTTGTCCCTCAACACATTCAAAACCAGCTTGCCAAAAAGGAGGAAGCAGCTGCTGCTT
CAGGTGGTGGATATGAATTCAAGAGTGAAATCAAGGGAGGTGCAGTGCCAAAAGAATATATCCCTGGTGTTATGAAGGGATTAGAAGAATGCATG
AGTAACGGAGTACTGGCAGGCTTTCCAGTTGTTGATGTTCGTGCTGTGCTAGTAGATGGATCTTACCATGATGTGGATTCAAGTGTTTTGGCATT
CCAGCTGGCTGCTCGGGGAGCTTTTAGGGAAGGGATGAGAAAAGCTGGTCCACAATTGCTAGAACCCATAATGAAGGTTGAAGTAGTTACACCAG
AAGAACATCTAGGGGATGTGATTGGTGACCTTAACTCAAGGAGAGGCCAGATCAACAGCTTTGGAGACAAGCCTGGAGGTCTCAAGGTGGTGGAT
TCTTTAGTTCCATTAGCAGAGATGTTCAATTACGTTAGTACCTTGCGAGGAATGACAAAGGGGCGTGCATCGTATGTTATGCAGTTAGCCAAATT
TGACGTTGTCCCTCAACACATTCAAAACCAGCTTGCCAAAAAGGAGGAAGCAGCTGCTGCTT
Unigenes |
Current Unigene builds | |||||
[SGN-E290886] | SGN-U579489 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T105055 [Download] [View] | Facility Assigned ID: TMEBM62TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 14.5 |