EST details — SGN-E292113
Search information |
Request: 292113 | Match: SGN-E292113 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C82334 | Clone name: cLET-1-K1 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179508 is on microarray TOM1: SGN-S1-1-7.4.2.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C82334 [cLET-1-K1] | Trace: SGN-T102388 | EST: SGN-E292114 | Direction: 3' | Facility: TIGR |
Clone: SGN-C179508 [TUS-31-P2] | Trace: SGN-T185606 | EST: SGN-E373468 | Direction: 3' | Facility: INRA |
Clone: SGN-C179508 [TUS-31-P2] | Trace: SGN-T185607 | EST: SGN-E373469 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E292113 | Length: 454 bp (555 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292113 [] (trimmed)
TTCAACAGAAAATTATGCCTGGTTTATGGAAGGATCTTCCTGGTAAGATCCATCACAAAGTGTCTGAAAATTGGATCAGCGCTACCCTCTTGCTT
GGTCCACTCGTCGGAACCTACTCGTATGTGCAGAACTTCCTGGAAAAGGAGAAGTTAGAACACAGATACTAAAACTGTTTCTTCATCAGTCTGTT
GGATACATCTCTATTCCATTTTGCAGTTTTCAACAGGAAATAAGCTGCCATTGTTGCATTTTTTTTTTTGGAACTTGTTATTTTGAAGATAATTT
ACTTGTATGGCGCCCTATAAATAACAACTAAATTCTCTGTTGGGGTCTTTTGATTGTCTTGTGCATCCTAAATCTTATTCAGAAATAGAGTTTTG
AAAATAATTTGTAATACATTTCATTGACTTGCTGTTGAAGTCCCATTGTGATTGCACAATGAACAATTTTTATT
GGTCCACTCGTCGGAACCTACTCGTATGTGCAGAACTTCCTGGAAAAGGAGAAGTTAGAACACAGATACTAAAACTGTTTCTTCATCAGTCTGTT
GGATACATCTCTATTCCATTTTGCAGTTTTCAACAGGAAATAAGCTGCCATTGTTGCATTTTTTTTTTTGGAACTTGTTATTTTGAAGATAATTT
ACTTGTATGGCGCCCTATAAATAACAACTAAATTCTCTGTTGGGGTCTTTTGATTGTCTTGTGCATCCTAAATCTTATTCAGAAATAGAGTTTTG
AAAATAATTTGTAATACATTTCATTGACTTGCTGTTGAAGTCCCATTGTGATTGCACAATGAACAATTTTTATT
Unigenes |
Current Unigene builds | |||||
[SGN-E292113] | SGN-U567580 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T102387 [Download] [View] | Facility Assigned ID: TMEAA61TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.946 | Expected Error Rate: 0.0008 | Quality Trim Threshold: 14.5 |