EST details — SGN-E292114
| Search information |
| Request: 292114 | Match: SGN-E292114 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82334 | Clone name: cLET-1-K1 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179508 is on microarray TOM1: SGN-S1-1-7.4.2.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C82334 [cLET-1-K1] | Trace: SGN-T102387 | EST: SGN-E292113 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C179508 [TUS-31-P2] | Trace: SGN-T185606 | EST: SGN-E373468 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179508 [TUS-31-P2] | Trace: SGN-T185607 | EST: SGN-E373469 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292114 | Length: 454 bp (556 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E292114 [] (trimmed)
AATAAAAATTGTTCATTGTGCAATCACAATGGGACTTCAACAGCAAGTCAATGAAATGTATTACAAATTATTTTCAAAACTCTATTTCTGAATAA
GATTTAGGATGCACAAGACAATCAAAAGACCCCAACAGAGAATTTAGTTGTTATTTATAGGGCGCCATACAAGTAAATTATCTTCAAAATAACAA
GTTCCAAAAAAAAAAATGCAACAATGGCAGCTTATTTCCTGTTGAAAACTGCAAAATGGAATAGAGATGTATCCAACAGACTGATGAAGAAACAG
TTTTAGTATCTGTGTTCTAACTTCTCCTTTTCCAGGAAGTTCTGCACATACGAGTAGGTTCCGACGAGTGGACCAAGCAAGAGGGTAGCGCTGAT
CCAATTTTCAGACACTTTGTGATGGATCTTACCAGGAAGATCCTTCCATAAACCAGGCATAATTTTCTGTTGAA
GATTTAGGATGCACAAGACAATCAAAAGACCCCAACAGAGAATTTAGTTGTTATTTATAGGGCGCCATACAAGTAAATTATCTTCAAAATAACAA
GTTCCAAAAAAAAAAATGCAACAATGGCAGCTTATTTCCTGTTGAAAACTGCAAAATGGAATAGAGATGTATCCAACAGACTGATGAAGAAACAG
TTTTAGTATCTGTGTTCTAACTTCTCCTTTTCCAGGAAGTTCTGCACATACGAGTAGGTTCCGACGAGTGGACCAAGCAAGAGGGTAGCGCTGAT
CCAATTTTCAGACACTTTGTGATGGATCTTACCAGGAAGATCCTTCCATAAACCAGGCATAATTTTCTGTTGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292114] | SGN-U567580 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102388 [Download] [View] | Facility Assigned ID: TMEAA61TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0001 | Quality Trim Threshold: 12.5 |
Working
