EST details — SGN-E292424
| Search information |
| Request: 292424 | Match: SGN-E292424 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82149 | Clone name: cLET-1-B12 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179381 is on microarray TOM1: SGN-S1-1-6.2.2.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179381 [TUS-31-J19] | Trace: SGN-T185408 | EST: SGN-E373270 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179381 [TUS-31-J19] | Trace: SGN-T185409 | EST: SGN-E373271 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292424 | Length: 608 bp (892 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292424 [] (trimmed)
CCCCGGGCTGCAAGCANCAATGGCTTCTTCAGTAATGTCCTCAGCAGCTGTTGCCACCCGCGGCAATGGTGCACAAGCTAGCATGGTTGCACCCT
TCACTGGACTCAAGTCCACCGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGTTGC
ATGCAGGTGTGGCCACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGACGAGCAATTGCTCAGCGAAATTGAGTA
CCTATTGAAAAATGGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACGATG
GCAGATACTGGACCATGTGGAAGTTGCCCATGTTCGGGTGCACTGATGCAACCCACGTCTTGGCTGAGGTGCACGAGGCAAAGAAGGCTTACCCA
CAGGCATGGGTCCGTATCATCGGATTCGACAATGTTCGTCAAGTGCAGTGCATCAGTTTCATCGCTTACAAGCCCGAAAGATACTAAATGTGTAT
ATGTCAACAGTGAGAAACTGTTCGCATTTTCCGTTTTG
TCACTGGACTCAAGTCCACCGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGTTGC
ATGCAGGTGTGGCCACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGACGAGCAATTGCTCAGCGAAATTGAGTA
CCTATTGAAAAATGGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACGATG
GCAGATACTGGACCATGTGGAAGTTGCCCATGTTCGGGTGCACTGATGCAACCCACGTCTTGGCTGAGGTGCACGAGGCAAAGAAGGCTTACCCA
CAGGCATGGGTCCGTATCATCGGATTCGACAATGTTCGTCAAGTGCAGTGCATCAGTTTCATCGCTTACAAGCCCGAAAGATACTAAATGTGTAT
ATGTCAACAGTGAGAAACTGTTCGCATTTTCCGTTTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292424] | SGN-U579638 | Tomato 200607 | Build 2 | 317 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102698 [Download] [View] | Facility Assigned ID: TMEAD06TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.986 | Expected Error Rate: 0.0170 | Quality Trim Threshold: 12.5 |
Working
