EST details — SGN-E293919
| Search information |
| Request: 293919 | Match: SGN-E293919 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C80794 | Clone name: cLET-13-G4 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C190856 [TUS-61-H22] | Trace: SGN-T341828 | EST: SGN-E540953 | Direction: 5' | Facility: INRA (MWG) |
| Clone: SGN-C190856 [TUS-61-H22] | Trace: SGN-T349344 | EST: SGN-E548469 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E293919 | Length: 465 bp (808 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293919 [] (trimmed)
GGAAGTACCGCTATCCGCCTGAATAATTCGATCACAATCTGACATGACCGCACTCTTCTGGCATGATATGTTGCATGATTTTTGATGAGGCCTAA
CTAAGTTGACCTCATGCATAAGTGGACTATTCTCCTTCTCACTTGACCTGATCCTGGAAAGTGGATTCATTTGCTCGATAGCTGAACTTGAAGCA
GATGGCTTACTTGAACTAAAGAAGCACCATCACCAATTTACAGAATCCCATTTAAGCATATTTAACTTTATTAATGCTTTCTGTTGGTTAGTAGG
GCCTATCTTCTTTCATTTAAATTACTGCTGCACATGTAAAAGGACTAAGGACCACCTCAATCAGATTCATTGACAGAATCAGACTGGTTGCACCC
TTCACTGGACTCAAGTCCACTGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTNGAA
CTAAGTTGACCTCATGCATAAGTGGACTATTCTCCTTCTCACTTGACCTGATCCTGGAAAGTGGATTCATTTGCTCGATAGCTGAACTTGAAGCA
GATGGCTTACTTGAACTAAAGAAGCACCATCACCAATTTACAGAATCCCATTTAAGCATATTTAACTTTATTAATGCTTTCTGTTGGTTAGTAGG
GCCTATCTTCTTTCATTTAAATTACTGCTGCACATGTAAAAGGACTAAGGACCACCTCAATCAGATTCATTGACAGAATCAGACTGGTTGCACCC
TTCACTGGACTCAAGTCCACTGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTNGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293919] | SGN-U578341 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105762 [Download] [View] | Facility Assigned ID: TMEBX38TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0083 | Quality Trim Threshold: 14.5 |
Working
