EST details — SGN-E294159
| Search information |
| Request: 294159 | Match: SGN-E294159 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C80722 | Clone name: cLET-13-D2 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179767 is on microarray TOM1: SGN-S1-1-4.2.1.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179767 [TUS-32-J21] | Trace: SGN-T186163 | EST: SGN-E373010 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179767 [TUS-32-J21] | Trace: SGN-T186164 | EST: SGN-E373011 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E294159 | Length: 566 bp (919 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E294159 [] (trimmed)
GCAGCCTCCCTCTCTCCTTCTTCTAGGAGGCAGCAGCGCCGCTACTCTTTCTCCTCCACGACGAGCTCCGGCGAAATGTGTCCGACGCCGTCCTC
TTTCTCCTCTCTCGCCTGACCCTTTCCCTTTACCCTCGCTCTTCCACCTTCTCCTCTCTCCTCTCTTCTCCAGGCCAGGTGAGGAGAATAACAGA
ATCTCCAACGACAGTAAGCAACAGTAATTGGAGAGAACTAGCGAGGCAGTGCAGCCAGCAGCTCCGGCGATGCAGTGAAACCAGGCTAGACTCAC
CGGCCAGGATCTTGATTTTAGAGTTCAAGGTTTTAAAGAATCCTTTTTTTAGAGGCGAAATCAGAATTTTCAAGAAGAGGGTTCAAACTCGATAA
AGGGGGTTTAACATCTACTATATATACATAAAAAATTATTTTAACCATGTATAAGTAATATAATTTTTCGCCGAAGGGGATTCGAATGAACCCTC
TTGGTTCAAGGTGGCTCCTCCCCTGGTCGCTTTGGAGAAGATGTCGATGGATTTTAGTTTCTTTGTGTATCTCTTTCGGTTTTATTTTGGT
TTTCTCCTCTCTCGCCTGACCCTTTCCCTTTACCCTCGCTCTTCCACCTTCTCCTCTCTCCTCTCTTCTCCAGGCCAGGTGAGGAGAATAACAGA
ATCTCCAACGACAGTAAGCAACAGTAATTGGAGAGAACTAGCGAGGCAGTGCAGCCAGCAGCTCCGGCGATGCAGTGAAACCAGGCTAGACTCAC
CGGCCAGGATCTTGATTTTAGAGTTCAAGGTTTTAAAGAATCCTTTTTTTAGAGGCGAAATCAGAATTTTCAAGAAGAGGGTTCAAACTCGATAA
AGGGGGTTTAACATCTACTATATATACATAAAAAATTATTTTAACCATGTATAAGTAATATAATTTTTCGCCGAAGGGGATTCGAATGAACCCTC
TTGGTTCAAGGTGGCTCCTCCCCTGGTCGCTTTGGAGAAGATGTCGATGGATTTTAGTTTCTTTGTGTATCTCTTTCGGTTTTATTTTGGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E294159] | SGN-U575448 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T106002 [Download] [View] | Facility Assigned ID: TMEBZ13TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0104 | Quality Trim Threshold: 12.5 |
Working
