EST details — SGN-E295083
| Search information |
| Request: 295083 | Match: SGN-E295083 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C85767 | Clone name: cLET-40-K1 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184830 is on microarray TOM1: SGN-S1-1-5.1.14.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184830 [TUS-45-M20] | Trace: SGN-T196571 | EST: SGN-E395245 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184830 [TUS-45-M20] | Trace: SGN-T198636 | EST: SGN-E397310 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E295083 | Length: 560 bp (854 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E295083 [] (trimmed)
TTGCAATGAAGAGGAGAGGGAACGTATAACAGCTTGTGGTGGAGAAGTTGGTCGGCTTAATGCTGGTGGCGGTACAGAGATTGGTCCTTTGAGAT
GTTGGCCTGGTGGACTCTGCCTCTCGAGATCCATTGGAGATATGGATGTTGGCGAATATATAGTTCCTGTACCCTATGTGAAGCAAGTAAAGCTA
ACATCAGCTGGTGGAAGGCTAGTAATAGCAAGTGACGGCGTCTGGGATGCTTTGTCTGCTGAATCGGCTATTGAATGTAGTCGTGGAATGCCTGC
AGATGCTGCAGCTTCTCAAATTGTTAAAGACGCCGTACAGCCAAAAGGGATTCGAGATGATACAACCTGTATTGTGGTCGATATACAGCTCCCAG
AAAAATCAAATCCTGCTCCGCCACCACCACCCAAAAGGTCAGGAAAAGGAGTATTCAAGTCTATGTTTCGCAAGAAGACTTCTGAGTCATCTTCT
AATATTCAGAAAGATTTTTGTGAACCGGATGTTGTGGAAGAACTATTTGAGGAGGGATCGGCATCACTTTCAGACAGGTTAGATG
GTTGGCCTGGTGGACTCTGCCTCTCGAGATCCATTGGAGATATGGATGTTGGCGAATATATAGTTCCTGTACCCTATGTGAAGCAAGTAAAGCTA
ACATCAGCTGGTGGAAGGCTAGTAATAGCAAGTGACGGCGTCTGGGATGCTTTGTCTGCTGAATCGGCTATTGAATGTAGTCGTGGAATGCCTGC
AGATGCTGCAGCTTCTCAAATTGTTAAAGACGCCGTACAGCCAAAAGGGATTCGAGATGATACAACCTGTATTGTGGTCGATATACAGCTCCCAG
AAAAATCAAATCCTGCTCCGCCACCACCACCCAAAAGGTCAGGAAAAGGAGTATTCAAGTCTATGTTTCGCAAGAAGACTTCTGAGTCATCTTCT
AATATTCAGAAAGATTTTTGTGAACCGGATGTTGTGGAAGAACTATTTGAGGAGGGATCGGCATCACTTTCAGACAGGTTAGATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E295083] | SGN-U571610 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T110316 [Download] [View] | Facility Assigned ID: TMEGA61TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0103 | Quality Trim Threshold: 14.5 |
Working
