EST details — SGN-E295208
| Search information |
| Request: 295208 | Match: SGN-E295208 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82595 | Clone name: cLET-20-J12 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C181914 is on microarray TOM1: SGN-S1-1-1.4.10.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181914 [TUS-38-D8] | Trace: SGN-T187759 | EST: SGN-E374489 | Direction: 3' | Facility: INRA |
| Clone: SGN-C181914 [TUS-38-D8] | Trace: SGN-T187760 | EST: SGN-E374490 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E295208 | Length: 582 bp (928 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E295208 [] (trimmed)
GACAAAGTCGGAGTAGTTGGCATGACTGGAGCTGGAAAATCTAGCATGTTTAATGCTTTGTTCCGACTTGTTGAGCTTGAAAGAGGAAGGATATT
AATAGATGATTATGATGTTTCAAAGTTTGGACTTACAGATCTACGGACGGTTCTTGGTATTATACCGCAAGCACCAGTTTTGTTCTCAGGGACCG
CGAGATTTAATCTTGATCCATTCAATGAGCACAATGATGCTGACCTCTGGGAGTCTCTAGAACGTGCGCACCTAAAGGACGTTATCAGGAGGAAC
TCTTTGGGTCTTGATGCGGAGGTCTCGGAAGCCGGAGAAAATTTCAGTGTTGGACAAAGACAGCTTTTAAGTCTTGCTAGAGCATTGCTTCGCCG
GTCAAAGATTCTTGTTCTTGATGAAGCAACTGCTGCTGTTGATGTTAGAACTGATGCTCTTATTCAGAAAACCATACGCGAAGAATTTAAGTCAT
GCACCATGCTCATTATTGCTCACCGTTTGAACACTATCATAGACTGTGACAGAATTCTTCTGCTTGATTCTGGTCAGGTACTTGAATATGATACT
CCGGAAGTATTA
AATAGATGATTATGATGTTTCAAAGTTTGGACTTACAGATCTACGGACGGTTCTTGGTATTATACCGCAAGCACCAGTTTTGTTCTCAGGGACCG
CGAGATTTAATCTTGATCCATTCAATGAGCACAATGATGCTGACCTCTGGGAGTCTCTAGAACGTGCGCACCTAAAGGACGTTATCAGGAGGAAC
TCTTTGGGTCTTGATGCGGAGGTCTCGGAAGCCGGAGAAAATTTCAGTGTTGGACAAAGACAGCTTTTAAGTCTTGCTAGAGCATTGCTTCGCCG
GTCAAAGATTCTTGTTCTTGATGAAGCAACTGCTGCTGTTGATGTTAGAACTGATGCTCTTATTCAGAAAACCATACGCGAAGAATTTAAGTCAT
GCACCATGCTCATTATTGCTCACCGTTTGAACACTATCATAGACTGTGACAGAATTCTTCTGCTTGATTCTGGTCAGGTACTTGAATATGATACT
CCGGAAGTATTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E295208] | SGN-U569979 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T107622 [Download] [View] | Facility Assigned ID: TMEDB54TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0088 | Quality Trim Threshold: 14.5 |
Working
