EST details — SGN-E296391
Search information |
Request: 296391 | Match: SGN-E296391 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C82069 | Clone name: cLET-19-L19 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C82069 [cLET-19-L19] | Trace: SGN-T107482 | EST: SGN-E296532 | Direction: 3' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E296391 | Length: 492 bp (855 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E296391 [] (trimmed)
TTTACATTACAACTAAAACAAAATGGAGTCAAAGTTTGCTCACATTATTGTTTTCTTTCTTCTTGCAACTTCCTTTGAGACTCTCATGGCACGAA
AAGAAATTGGTGGACCAGAAGTCATCGAACTTCTAAAGGAATATGAATCTAACTTGATGTGCAAAGGAAAACGAATGTGGCCAGAACTTATTGGT
GTACCAGCACAATATGCTAAGGGAATAATTGAAAAGGAAAATCCATTCATAACTGATGTTCGGATAGGATTGATTGGTTCTCCAGGCACAGCTGA
TTTTAAGTGTTTTCGAGTTCGTATTGCTGTAAACATCTTGGATGTTGCTGTATCAATGCCTGTGATTGGTTAATTAATGAAGTAATTAAGTAGCC
ACATGTCAAAAAATAATTAGGGTTCATGTCTGTTCATTAATTATAATGTACCCATGCATGTACTCTTACAATACATAATGGAATAAATAAGTGTG
ACTTGATTAAATATTAA
AAGAAATTGGTGGACCAGAAGTCATCGAACTTCTAAAGGAATATGAATCTAACTTGATGTGCAAAGGAAAACGAATGTGGCCAGAACTTATTGGT
GTACCAGCACAATATGCTAAGGGAATAATTGAAAAGGAAAATCCATTCATAACTGATGTTCGGATAGGATTGATTGGTTCTCCAGGCACAGCTGA
TTTTAAGTGTTTTCGAGTTCGTATTGCTGTAAACATCTTGGATGTTGCTGTATCAATGCCTGTGATTGGTTAATTAATGAAGTAATTAAGTAGCC
ACATGTCAAAAAATAATTAGGGTTCATGTCTGTTCATTAATTATAATGTACCCATGCATGTACTCTTACAATACATAATGGAATAAATAAGTGTG
ACTTGATTAAATATTAA
Unigenes |
Current Unigene builds | |||||
[SGN-E296391] | SGN-U581582 | Tomato 200607 | Build 2 | 35 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T107341 [Download] [View] | Facility Assigned ID: TMECW70TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.948 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |