EST details — SGN-E300043
Search information |
Request: 300043 | Match: SGN-E300043 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C88961 | Clone name: cLEW-11-C11 |
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Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E300043 | Length: 535 bp (916 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E300043 [] (trimmed)
GTTTTTTTTGATTAATTAAGCAATCGGAATCTACCAAGAAGAATGCGTAATCAACAGCAATGGCTTCTCCTTCTTCTCCGGCACCATTCTCTAGC
TCAGCCGCACATTTCCAGGCACCTCATCAATCAATCTCCGTTTCAGGTAAATCGATCTATTAGTTCTATCGCTTCTTCAACTATCCACTCACGTG
CATCTCACATGCTCCCTTACCAATCACTCACTGTTCATAGTTTCTCCACATCTGAATTGGCGGTCGAACACAAAGTTTCAGATCAAATCGCTGTT
TTAACTGGTATTTTCTCTAAACCAAACCGGAGTAATGAAGAAATTAAGATTGATTTAGAGTCTAATAATGTTACTGTCACGCATGATTTGGTTAT
AAGGGCGTTAAGGAGCTTTAATACCGCCCCTGATGCGGCACGTAAGTTTTTTAACTGGGTTAAGGAGAATGAGAGCGAGAGGTTGAGTTCAAAGG
TGTATAATTATATGTTAGGGATATTGGGGTCTAATGGGTTTGTCAAGGAGTTTTGGAGTA
TCAGCCGCACATTTCCAGGCACCTCATCAATCAATCTCCGTTTCAGGTAAATCGATCTATTAGTTCTATCGCTTCTTCAACTATCCACTCACGTG
CATCTCACATGCTCCCTTACCAATCACTCACTGTTCATAGTTTCTCCACATCTGAATTGGCGGTCGAACACAAAGTTTCAGATCAAATCGCTGTT
TTAACTGGTATTTTCTCTAAACCAAACCGGAGTAATGAAGAAATTAAGATTGATTTAGAGTCTAATAATGTTACTGTCACGCATGATTTGGTTAT
AAGGGCGTTAAGGAGCTTTAATACCGCCCCTGATGCGGCACGTAAGTTTTTTAACTGGGTTAAGGAGAATGAGAGCGAGAGGTTGAGTTCAAAGG
TGTATAATTATATGTTAGGGATATTGGGGTCTAATGGGTTTGTCAAGGAGTTTTGGAGTA
Unigenes |
Current Unigene builds | |||||
[SGN-E300043] | SGN-U574542 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T112883 [Download] [View] | Facility Assigned ID: TRDBO18TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.967 | Expected Error Rate: 0.0040 | Quality Trim Threshold: 14.5 |