EST details — SGN-E300412
| Search information |
| Request: 300412 | Match: SGN-E300412 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C87005 | Clone name: cLET-45-A12 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C185078 is on microarray TOM1: SGN-S1-1-5.4.12.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185078 [TUS-46-H4] | Trace: SGN-T192007 | EST: SGN-E390681 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185078 [TUS-46-H4] | Trace: SGN-T192259 | EST: SGN-E390933 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E300412 | Length: 499 bp (985 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E300412 [] (trimmed)
CAAGCACAGTAATGAGCTCATTGAGCCTAAAGCCAACTTTCACTCTGGAGAAAATATCAGTGAAAGGGCTTCCATCACTTACTAGATCTTCTTCT
TCCTTCAAAGTTGTGGCTAGTGGTGTTAAGAAGCTTAAGACTGACAAACCCTATGGAATTAATGGAAGCATGGCCTTGAGAGATGGGGTTGATGC
CTCAGGCAGGAAGCCCAAGGGAAAGGGTGTGTACCAATATGTTGACAAATATGGAGCTAATGTTGATGGATACAGTCCCATCTACAACACGGATG
AATGGTCTCCAAGTGGTGATGTCTATGTTGGAGGTACCACTGGCTTAGCCATATGGGCGGTGACCTTGCTTGGCATTCTTGCAGGAGGTGCTCTC
CTTGTCTACAACACAAGTGCTTTGGCGCAATAGATGTTATCCTTGTATTGGACTATTAAGTGTAAGTTGTATTCCATGTTATCTTTTCAAAATAT
TTCTTGGCATCTTCATTAATATGT
TCCTTCAAAGTTGTGGCTAGTGGTGTTAAGAAGCTTAAGACTGACAAACCCTATGGAATTAATGGAAGCATGGCCTTGAGAGATGGGGTTGATGC
CTCAGGCAGGAAGCCCAAGGGAAAGGGTGTGTACCAATATGTTGACAAATATGGAGCTAATGTTGATGGATACAGTCCCATCTACAACACGGATG
AATGGTCTCCAAGTGGTGATGTCTATGTTGGAGGTACCACTGGCTTAGCCATATGGGCGGTGACCTTGCTTGGCATTCTTGCAGGAGGTGCTCTC
CTTGTCTACAACACAAGTGCTTTGGCGCAATAGATGTTATCCTTGTATTGGACTATTAAGTGTAAGTTGTATTCCATGTTATCTTTTCAAAATAT
TTCTTGGCATCTTCATTAATATGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E300412] | SGN-U581090 | Tomato 200607 | Build 2 | 465 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T111584 [Download] [View] | Facility Assigned ID: TMEGV06TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 12.5 |
Working
