EST details — SGN-E300518
Search information |
Request: 300518 | Match: SGN-E300518 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C87278 | Clone name: cLET-45-N20 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C180047 [TUS-33-F13] | Trace: SGN-T186810 | EST: SGN-E374196 | Direction: 3' | Facility: INRA |
Clone: SGN-C180047 [TUS-33-F13] | Trace: SGN-T186811 | EST: SGN-E374197 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E300518 | Length: 433 bp (964 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E300518 [] (trimmed)
CTGGAGGATTCTTTCAACGAGGCCTTTGTAATGGTGGATGACCAACGGGCCAGAAGAAGTGGGCTTGCACTGCTGAAGAAAATAGCAGACTTGCC
AAGGGGAATAGTAGATCTTTCAGTTTTACCGGGATTTTGAAGTATGTACCAGTGTCCGCTTAGTTTGTGCCATACTATCATCTGAGGCATCAAAG
AAGAACAGCTATTGCCCATAAGCGGAGGAGAAAACAGTTAACAGACTAATGTTTTTTCCGCGGAGGCAGCTGCAACCACAACAGAGCGAACTAGA
GGAGAAACTGTTACATAAATCTGGTAACGATGTCATAATTTTGACTGTTGTACAAGTATGTAACAAGTGAATGAATAATAAAATGAACTATCGCT
TGTATGTTCACATTGCCTGAGGAATATATATCATTGTGTTTTAAGTTCAACAA
AAGGGGAATAGTAGATCTTTCAGTTTTACCGGGATTTTGAAGTATGTACCAGTGTCCGCTTAGTTTGTGCCATACTATCATCTGAGGCATCAAAG
AAGAACAGCTATTGCCCATAAGCGGAGGAGAAAACAGTTAACAGACTAATGTTTTTTCCGCGGAGGCAGCTGCAACCACAACAGAGCGAACTAGA
GGAGAAACTGTTACATAAATCTGGTAACGATGTCATAATTTTGACTGTTGTACAAGTATGTAACAAGTGAATGAATAATAAAATGAACTATCGCT
TGTATGTTCACATTGCCTGAGGAATATATATCATTGTGTTTTAAGTTCAACAA
Unigenes |
Current Unigene builds | |||||
[SGN-E300518] | SGN-U587616 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T111690 [Download] [View] | Facility Assigned ID: TMEGX82TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.972 | Expected Error Rate: 0.0123 | Quality Trim Threshold: 14.5 |