EST details — SGN-E300518
| Search information |
| Request: 300518 | Match: SGN-E300518 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C87278 | Clone name: cLET-45-N20 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180047 [TUS-33-F13] | Trace: SGN-T186810 | EST: SGN-E374196 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180047 [TUS-33-F13] | Trace: SGN-T186811 | EST: SGN-E374197 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E300518 | Length: 433 bp (964 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E300518 [] (trimmed)
CTGGAGGATTCTTTCAACGAGGCCTTTGTAATGGTGGATGACCAACGGGCCAGAAGAAGTGGGCTTGCACTGCTGAAGAAAATAGCAGACTTGCC
AAGGGGAATAGTAGATCTTTCAGTTTTACCGGGATTTTGAAGTATGTACCAGTGTCCGCTTAGTTTGTGCCATACTATCATCTGAGGCATCAAAG
AAGAACAGCTATTGCCCATAAGCGGAGGAGAAAACAGTTAACAGACTAATGTTTTTTCCGCGGAGGCAGCTGCAACCACAACAGAGCGAACTAGA
GGAGAAACTGTTACATAAATCTGGTAACGATGTCATAATTTTGACTGTTGTACAAGTATGTAACAAGTGAATGAATAATAAAATGAACTATCGCT
TGTATGTTCACATTGCCTGAGGAATATATATCATTGTGTTTTAAGTTCAACAA
AAGGGGAATAGTAGATCTTTCAGTTTTACCGGGATTTTGAAGTATGTACCAGTGTCCGCTTAGTTTGTGCCATACTATCATCTGAGGCATCAAAG
AAGAACAGCTATTGCCCATAAGCGGAGGAGAAAACAGTTAACAGACTAATGTTTTTTCCGCGGAGGCAGCTGCAACCACAACAGAGCGAACTAGA
GGAGAAACTGTTACATAAATCTGGTAACGATGTCATAATTTTGACTGTTGTACAAGTATGTAACAAGTGAATGAATAATAAAATGAACTATCGCT
TGTATGTTCACATTGCCTGAGGAATATATATCATTGTGTTTTAAGTTCAACAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E300518] | SGN-U587616 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T111690 [Download] [View] | Facility Assigned ID: TMEGX82TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0123 | Quality Trim Threshold: 14.5 |
Working
