EST details — SGN-E300822

Search information 
Request: 300822Match: SGN-E300822
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C91845Clone name: cLEW-8-K6
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C191447 [TUS-63-A13] Trace: SGN-T342841 EST: SGN-E541966 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C191447 [TUS-63-A13] Trace: SGN-T342843 EST: SGN-E541968 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E300822Length: 551 bp (879 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E300822 [] (trimmed) GATTTTGTGTCTGATAGATCTCAAATTCTTCAGTTCTGCCATTGAAGTAGTTGTGGAGCTTAAGTAACTGATATTGAATTCGTGAAGACCAAAAA
AATGGGTGTAGATGATGAAGTACCGATTGACGATAAAGCGAAGAGAATGAGAGATCTATTATCGAGCTTTTACTGTCCAGATCCTAATTCTACTT
CAGTTCCGCCTAATACTTCTTCCAGATTTGCAACTTTGGATACCATTAACACTACTGCCTTCGATGCCGATCAGTACATGAATTTACTTGTGCAG
AAGTCCAATTTGGAAGGTATGCTTCAGAGGCATGTAGAAATGGCTGCTGAGATAAAGAATCTCGATACTGACCTGCAAATGCTGGTATATGAAAA
TTACAACAAGTTCGTAAGTGCCACAGACACAATTAATAGGATGAAAAACAATATTGTTGGCATGGAGACAAGTATGGAGCAGCTTCTTGAAAAGA
TAATGTCCGTGCAATCTAAAAGTGATGGGGACAATACTTGTCTTTTTGAGAAGAGGGAACACATTGAGAAATTGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E300822] SGN-U575451 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T112427 [Download] [View] Facility Assigned ID: TRDBD63TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0187 Quality Trim Threshold: 14.5