EST details — SGN-E301384

Search information 
Request: 301384Match: SGN-E301384
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C90829Clone name: cLEW-24-F16
cartOrder Clone
Library Name: cLEWOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C191904 [TUS-64-D14] Trace: SGN-T343632 EST: SGN-E542757 Direction: 5' Facility: INRA (MWG)
Clone: SGN-C191904 [TUS-64-D14] Trace: SGN-T349641 EST: SGN-E548766 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E301384Length: 408 bp (850 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E301384 [] (trimmed) GATTTTAGAGTTTTTCTTTTCTTAGCCTTTTTTGTTGCTTCTTCTATAGCTCAATCTCCGGCTCCGGCACCTAAAATTTCTCCGGCAGCAACTCC
AACTCCGGCGCCGGCACCAGTATTATCACCGCCGACCGCAACTCCAACTCCATCTCCAACTCCGACACCAACTCCGGCACCTTCTACCGCTCCTA
CTACTTCACCAACTCCATCTCCGGCTGCTTCCGCAACTTCTCCATCGCCGGGACCATCCGGTGCCGGCGTCGTTTCACCACCAGCACCTACTCCT
ACCGGTGGTGCACCGGCGGATCAGCCTTCTGCCGACAACACACCGTCGTCGCCTAACGCCGGTAACAGAGCCGTCATTGGCGGTGCTGCGTTCGC
TGGCGTGATCATCGCTGCTGCTTTGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E301384] SGN-U576576 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T114507 [Download] [View] Facility Assigned ID: TRDDR32TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0065 Quality Trim Threshold: 12.5