EST details — SGN-E301702
| Search information |
| Request: 301702 | Match: SGN-E301702 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C90756 | Clone name: cLEW-23-P2 |
| ||
| Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C191884 [TUS-64-C18] | Trace: SGN-T343597 | EST: SGN-E542722 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C191884 [TUS-64-C18] | Trace: SGN-T343598 | EST: SGN-E542723 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E301702 | Length: 581 bp (919 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E301702 [] (trimmed)
GTCCACACACACACACAAAAAAAAAAAATCAAAAAAACAACCGGTCAAAAGAGAGAAAAATATTAGTTTTTTTTTGTTTCTTGATCTATTTCAAG
TTTTCAACATTGATACTAAAATTCATTGTTATCAATTTTTTCAATCGGTTTATTTTGCGATTTTTTGTACCGATAGTTTCAATTTTGGTGCTTAT
CCATTTGATTCTTTAACGAGATCTACCATTTTTGTTTTGTCTACTTTTTCTACTGCATTTATCGGCGGGTCGCCGACAGAGTTTTCTTGATTCCC
CGGTTATTTCTTTTTATCTTTGTTATTGATTCTTTCGGTTAATAGACAAGTGATAATAGCTGGAAAGTTTGGCAGCAGTGCGTCTGGTGTTTTGC
TGTTCCTTTCTTTTCTTCACGCGTGGCGTTCCTCTTAATGCTTAAAGCTCTGTTTTTCTAACTGGTTTTGGATTTGGGAAAAAGATAAATGGATA
TGTACTGTGAAGTCAATGGTTTGATCTAATTTCTGAAAAATTCAACGTCAGCAAATATTTTTAAAATTTAATTTCTTCGTAATAATCCTCTGTTT
TACCATTACCC
TTTTCAACATTGATACTAAAATTCATTGTTATCAATTTTTTCAATCGGTTTATTTTGCGATTTTTTGTACCGATAGTTTCAATTTTGGTGCTTAT
CCATTTGATTCTTTAACGAGATCTACCATTTTTGTTTTGTCTACTTTTTCTACTGCATTTATCGGCGGGTCGCCGACAGAGTTTTCTTGATTCCC
CGGTTATTTCTTTTTATCTTTGTTATTGATTCTTTCGGTTAATAGACAAGTGATAATAGCTGGAAAGTTTGGCAGCAGTGCGTCTGGTGTTTTGC
TGTTCCTTTCTTTTCTTCACGCGTGGCGTTCCTCTTAATGCTTAAAGCTCTGTTTTTCTAACTGGTTTTGGATTTGGGAAAAAGATAAATGGATA
TGTACTGTGAAGTCAATGGTTTGATCTAATTTCTGAAAAATTCAACGTCAGCAAATATTTTTAAAATTTAATTTCTTCGTAATAATCCTCTGTTT
TACCATTACCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E301702] | SGN-U570470 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T114339 [Download] [View] | Facility Assigned ID: TRDDN85TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.922 | Expected Error Rate: 0.0086 | Quality Trim Threshold: 12.5 |
Working
