EST details — SGN-E302525
| Search information |
| Request: 302525 | Match: SGN-E302525 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C93912 | Clone name: cLEX-1-E21 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C93912 [cLEX-1-E21] | Trace: SGN-T115109 | EST: SGN-E302526 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C192064 [TUS-64-K6] | Trace: SGN-T343906 | EST: SGN-E543031 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192064 [TUS-64-K6] | Trace: SGN-T343907 | EST: SGN-E543032 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E302525 | Length: 656 bp (910 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E302525 [] (trimmed)
GCAACTAGTACCACCCCATGATCAATGTTTACCAACAAGATGTGGCGATTTCGGTCCGGTGATTCGATTCCCTTTTCATCTCAAAAATCATCAGC
CAAGTCATTGTGGTTACCCTGGTTTCGAACTATCTTGTACTTCAAAAAACATTACTCAATTCAATCTCCGATTTCCAATACAAGCAACTATCAAC
AAATTCGACATTTCGATATCAGCTAACGTTTCTGTTGAGGAAATTAATTACAAATCACAGACAATAACATTATCAGACCTCAATGCTTCGTGTCT
TCCCAGACAGATTGCAAACACAAACTCCTCTGCTTCCATTTTCACTTTTGATCCGAACGCGTATGGTGGATTCACTTTATTCAATTGCTCGTCAA
AGCAAAAATATTCATCGGCTTCTATTCGAATCGATTGCCTTAGCAGTCCTCAGTATGATGTCCTTGCTTTTAGATCTTACAATAGTATTTCTGAG
TATCCCTCATCTTGTACAATGATGTACAACATTTCAGATGTTCCCTACGAGCTACTTTACGGGAAGCAAGAATATAGTTATACACGAATATTTCT
GCATTGGTCTGAACCATTTTGTGGGAATTGTGAAGAGGATGGGAAGTACTGCAAGATGAAATCCAATAGTTCAAGGAGTGAAACTG
CAAGTCATTGTGGTTACCCTGGTTTCGAACTATCTTGTACTTCAAAAAACATTACTCAATTCAATCTCCGATTTCCAATACAAGCAACTATCAAC
AAATTCGACATTTCGATATCAGCTAACGTTTCTGTTGAGGAAATTAATTACAAATCACAGACAATAACATTATCAGACCTCAATGCTTCGTGTCT
TCCCAGACAGATTGCAAACACAAACTCCTCTGCTTCCATTTTCACTTTTGATCCGAACGCGTATGGTGGATTCACTTTATTCAATTGCTCGTCAA
AGCAAAAATATTCATCGGCTTCTATTCGAATCGATTGCCTTAGCAGTCCTCAGTATGATGTCCTTGCTTTTAGATCTTACAATAGTATTTCTGAG
TATCCCTCATCTTGTACAATGATGTACAACATTTCAGATGTTCCCTACGAGCTACTTTACGGGAAGCAAGAATATAGTTATACACGAATATTTCT
GCATTGGTCTGAACCATTTTGTGGGAATTGTGAAGAGGATGGGAAGTACTGCAAGATGAAATCCAATAGTTCAAGGAGTGAAACTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E302525] | SGN-U569082 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T115108 [Download] [View] | Facility Assigned ID: TRXAA35TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0068 | Quality Trim Threshold: 14.5 |
Working
