EST details — SGN-E302848

Search information 
Request: 302848Match: SGN-E302848
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C98345Clone name: cLEY-2-M19
cartOrder Clone
Library Name: cLEYOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: root
Development Stage: pre-anthesis/pre-fruit loading

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C192668 [TUS-66-D10] Trace: SGN-T344944 EST: SGN-E544069 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C192668 [TUS-66-D10] Trace: SGN-T344945 EST: SGN-E544070 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E302848Length: 484 bp (928 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E302848 [] (trimmed) GAGGTGAAATTTCAGCTGATGAGGCTGCACAGCAAGCTGCTGTAATGCGATCTCAAATACATTTATTTTGGGGTAATATGCTTTTTGAGCGGTCT
CAAGTTGAATGTAAATTGGGGTTGATTGGTTGGAAGGAGAAGCTTGATACTGCTGTTGAAAGATTTAAGCTTGCTGGAGCTTCTGAAATTGACAT
CTCAACAGTTCTGAAGAATCATTGTTCCAATGAAGAAGCTACCCAGGGATCTCAGGAAATGGTTGAGAGCCTGAAGACTGAGGGGAATGATAATC
CAAATGACTAGAATGATGCTAGTAAAGCTTAGGCTACCTGACACTAATTTTAGCAATATTTATTTTTCTTACAAACAACATTTATGTTCACGAGA
TAAGAAAATTTTGGCCTTGCAACGTCAATTATACATTTAAGTTTTTATGATGAAACAAGAAGTTTGCTGTTATATGGGAACTATTATGATATAGT
CAATTTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E302848] SGN-U572944 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T118531 [Download] [View] Facility Assigned ID: TRYAE82TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.931 Expected Error Rate: 0.0016 Quality Trim Threshold: 12.5