EST details — SGN-E303929
| Search information |
| Request: 303929 | Match: SGN-E303929 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C94588 | Clone name: cLEX-4-M18 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192187 [TUS-64-P9] | Trace: SGN-T344118 | EST: SGN-E543243 | Direction: 5' | Facility: INRA (MWG) |
| Clone: SGN-C192187 [TUS-64-P9] | Trace: SGN-T349721 | EST: SGN-E548846 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E303929 | Length: 496 bp (896 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E303929 [] (trimmed)
GCTATGTGTTTGTGTCACCACACACAAGTAACGACCCCTCAATTTGTCAATAAACAAATAAGAGGAGTTGTTGATTATCAAAGGAAGAAGAAGAA
GATTATGAAATTTCAATGATGATTTGTGTTAGGGTTAAGAGATTATGAAGATGAGAATGGAATTAGTTGAACGACGAGGACGACAACAACAACGA
CAAGAAGAAAAAGGAGCATTTGAGAGGAAGAGTAGTAGGGAAAAAAGTACAAGAAGAAGGATGACAATTAGTATTGTGGAAGAAGAAGAAGAAGA
AGAAGAAGAGAGCCCTAAGATTGTGGATCTAAGTGGCATGTCATTGGATTTTATTCCTGTAAATCCTACTATAAATTTGGGAGCTATATCCAAAT
TACATATTTCCAACAATAATCTTCAGAGTATACCAGAGTCTTTAACAGCAAGACTACTAAACTTGGTTGAGTTAGATATGCACTCAAATCAGCTC
AACTCCATTCCTAACTCAATA
GATTATGAAATTTCAATGATGATTTGTGTTAGGGTTAAGAGATTATGAAGATGAGAATGGAATTAGTTGAACGACGAGGACGACAACAACAACGA
CAAGAAGAAAAAGGAGCATTTGAGAGGAAGAGTAGTAGGGAAAAAAGTACAAGAAGAAGGATGACAATTAGTATTGTGGAAGAAGAAGAAGAAGA
AGAAGAAGAGAGCCCTAAGATTGTGGATCTAAGTGGCATGTCATTGGATTTTATTCCTGTAAATCCTACTATAAATTTGGGAGCTATATCCAAAT
TACATATTTCCAACAATAATCTTCAGAGTATACCAGAGTCTTTAACAGCAAGACTACTAAACTTGGTTGAGTTAGATATGCACTCAAATCAGCTC
AACTCCATTCCTAACTCAATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E303929] | SGN-U566864 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T115866 [Download] [View] | Facility Assigned ID: TRXAN81TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.927 | Expected Error Rate: 0.0039 | Quality Trim Threshold: 14.5 |
Working
