EST details — SGN-E304114
Search information |
Request: 304114 | Match: SGN-E304114 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C94936 | Clone name: cLEX-6-H16 |
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Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C192267 [TUS-65-C17] | Trace: SGN-T344255 | EST: SGN-E543380 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C192267 [TUS-65-C17] | Trace: SGN-T344256 | EST: SGN-E543381 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E304114 | Length: 522 bp (850 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E304114 [] (trimmed)
GCGTTGATCCAGATTCTGACAAGAGACCAAACATGAGCCAAGTTGTTCGTGTGCTTGAATTATAGGAATATCCCATACCAAGAGAGGATCGAAGG
CAACGAAGATCTCAAGCAGGTAACGGGGAGAGTGATTCTCAAAACTATGACACTGACAAGAGTGACAACCCAGATCCAAGGTCTGAAAGTAGAAG
AAGCCATCAAGTATAACCATCAAAGACACATCTTTCTGGTCTTTCATGAGAAGTGTGCCATAACAAAGCTTTCATTATAATGAAAGTCTACGGGA
TCAAATGAGCAGGACTATGAACTGTTTCTGCTGGTATATAGATGGTCAGAAGAGATTGACTACTTTTCTTCTACCTTCAAGGGTGCTATGCTGTC
TTAATATCTCTTATTTGTATCATGTCTTTTTCTTCTTCATTATGGATCTTTCCTTGTATGAAAGTAGATAGGGAGTAAATTGATGTGGACTTAAT
GGTCATGTGACTAAACTGGCAGCTATCAAGGGCGGAGGTTTGTGTAC
CAACGAAGATCTCAAGCAGGTAACGGGGAGAGTGATTCTCAAAACTATGACACTGACAAGAGTGACAACCCAGATCCAAGGTCTGAAAGTAGAAG
AAGCCATCAAGTATAACCATCAAAGACACATCTTTCTGGTCTTTCATGAGAAGTGTGCCATAACAAAGCTTTCATTATAATGAAAGTCTACGGGA
TCAAATGAGCAGGACTATGAACTGTTTCTGCTGGTATATAGATGGTCAGAAGAGATTGACTACTTTTCTTCTACCTTCAAGGGTGCTATGCTGTC
TTAATATCTCTTATTTGTATCATGTCTTTTTCTTCTTCATTATGGATCTTTCCTTGTATGAAAGTAGATAGGGAGTAAATTGATGTGGACTTAAT
GGTCATGTGACTAAACTGGCAGCTATCAAGGGCGGAGGTTTGTGTAC
Unigenes |
Current Unigene builds | |||||
[SGN-E304114] | SGN-U584803 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T116132 [Download] [View] | Facility Assigned ID: TRXAX44TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.969 | Expected Error Rate: 0.0342 | Quality Trim Threshold: 12.5 |