EST details — SGN-E304131
Search information |
Request: 304131 | Match: SGN-E304131 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C94861 | Clone name: cLEX-6-A1 |
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Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C94861 [cLEX-6-A1] | Trace: SGN-T116009 | EST: SGN-E303991 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E304131 | Length: 448 bp (787 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E304131 [] (trimmed)
GATAATCCCACTGAACCATTTCACTAGACATTAAAATATGAAATACATCAACAGTTGGTAGCAGTATAGAGATTGTTTTACACACATACCTTAAC
TCAGTAATAACCTACATACACCATATTTTTGCTTAGAGTTACAACTTTGGACACACTGTAAGTACACCAATAAACAAGGTTCAGGGGAATTTGTT
AAACGTACACTAAAGTGGCGCTTCTTCTGAAGCTATTCATCAAGCTTCTAAAAACAGTTGGTGTCGTAGGTAGCGAGTCCCAACAACTCCGGACC
TTCAAGTCGAGGATTGTGCTCGAAATTGTTTAGAGGAATATGCTCAAATGGACCAGAAGTAGGAATTGTTCCACACAAATCATTATTCGAGACAT
CCACAACTTTCAGGCTAGAAATGCTAGTAAGTTCTGTTGGGATTGGACCTGTTAGCTTGTTATCATTT
TCAGTAATAACCTACATACACCATATTTTTGCTTAGAGTTACAACTTTGGACACACTGTAAGTACACCAATAAACAAGGTTCAGGGGAATTTGTT
AAACGTACACTAAAGTGGCGCTTCTTCTGAAGCTATTCATCAAGCTTCTAAAAACAGTTGGTGTCGTAGGTAGCGAGTCCCAACAACTCCGGACC
TTCAAGTCGAGGATTGTGCTCGAAATTGTTTAGAGGAATATGCTCAAATGGACCAGAAGTAGGAATTGTTCCACACAAATCATTATTCGAGACAT
CCACAACTTTCAGGCTAGAAATGCTAGTAAGTTCTGTTGGGATTGGACCTGTTAGCTTGTTATCATTT
Unigenes |
Current Unigene builds | |||||
[SGN-E304131] | SGN-U583216 | Tomato 200607 | Build 2 | 165 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T116149 [Download] [View] | Facility Assigned ID: TRXAU01TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.960 | Expected Error Rate: 0.0190 | Quality Trim Threshold: 14.5 |