EST details — SGN-E304134
Search information |
Request: 304134 | Match: SGN-E304134 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C94863 | Clone name: cLEX-6-A13 |
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Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C94863 [cLEX-6-A13] | Trace: SGN-T116014 | EST: SGN-E303996 | Direction: 3' | Facility: TIGR |
Clone: SGN-C192247 [TUS-65-B21] | Trace: SGN-T344221 | EST: SGN-E543346 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C192247 [TUS-65-B21] | Trace: SGN-T349738 | EST: SGN-E548863 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E304134 | Length: 355 bp (908 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E304134 [] (trimmed)
TTTTTCTTGACAGACTGCCGACGGGAAGCTGTGTTCAAAACCCAGAGTTTGTTCTTGAAGTTATGGGGGTTGTTGGCAGTTGGTTTCGTTACACC
CAATGACAGAGAAGAGCTGACAATCTTTTTTTTTTTTCTCTCTCACACAAATCATCATTATATAAAGAAGACTTTGGACTCTGTTACAAGTCCGA
AAATATCAGATGTTCATTCTCTAACCTCAAATCGAACCTTTTTTTTCTTTAATTTTTGGGTTTTTTTGTTGTGATTTGGATCAATGTCGAAGAAT
ATATTGGTGACGGGTGGAGCTGGGTATATTGGGAGTCACACGGTGTTACAGTTGCTGTTGGGTGGTTATA
CAATGACAGAGAAGAGCTGACAATCTTTTTTTTTTTTCTCTCTCACACAAATCATCATTATATAAAGAAGACTTTGGACTCTGTTACAAGTCCGA
AAATATCAGATGTTCATTCTCTAACCTCAAATCGAACCTTTTTTTTCTTTAATTTTTGGGTTTTTTTGTTGTGATTTGGATCAATGTCGAAGAAT
ATATTGGTGACGGGTGGAGCTGGGTATATTGGGAGTCACACGGTGTTACAGTTGCTGTTGGGTGGTTATA
Unigenes |
Current Unigene builds | |||||
[SGN-E304134] | SGN-U589830 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T116152 [Download] [View] | Facility Assigned ID: TRXAU07THB |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.921 | Expected Error Rate: 0.0202 | Quality Trim Threshold: 14.5 |