EST details — SGN-E304182
| Search information |
| Request: 304182 | Match: SGN-E304182 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C94954 | Clone name: cLEX-6-I23 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C94954 [cLEX-6-I23] | Trace: SGN-T116060 | EST: SGN-E304042 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192274 [TUS-65-C24] | Trace: SGN-T344267 | EST: SGN-E543392 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192274 [TUS-65-C24] | Trace: SGN-T344268 | EST: SGN-E543393 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E304182 | Length: 488 bp (761 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E304182 [] (trimmed)
ATTTATTGAGCAATCAAAACAAGAAGATACAATGTCTACATAATTAACAAATTAACACACAACTCTACAAAGTCTCTCCATTCGCAATTAACTTG
CTTTATGGAACAGAGGCTCTTGAGTAAAAATCACAATTACACTGGAAAACAATCAAATTCTTGAAACAATTATTCATGAATCAACATTATCTTAG
ACGTTCACCTTCCTGCAGTTTACGCGAATTTGGCCTTGATTCCCTGTCAATGGCTTAATATTTCCCATCTTAATCATAGACTCGGCAAAATCTTT
AGAGAAACTCCCGAGGTTGGTACTATATTTCTTAACAAGATTATCAGTTTGACCGCCATTAAATAGTGCTTGATCAGAGTGCAAAAGTCCTTTCT
TGGACACCAAGTTACTAAAATATTTTGAATCAAAAAGAGCTGGAGTTGGATCAAGTGGAGCAAGGTTGGTATTGCCTCCACTGCGTGGACAATTG
GCTTTGCGTTGGC
CTTTATGGAACAGAGGCTCTTGAGTAAAAATCACAATTACACTGGAAAACAATCAAATTCTTGAAACAATTATTCATGAATCAACATTATCTTAG
ACGTTCACCTTCCTGCAGTTTACGCGAATTTGGCCTTGATTCCCTGTCAATGGCTTAATATTTCCCATCTTAATCATAGACTCGGCAAAATCTTT
AGAGAAACTCCCGAGGTTGGTACTATATTTCTTAACAAGATTATCAGTTTGACCGCCATTAAATAGTGCTTGATCAGAGTGCAAAAGTCCTTTCT
TGGACACCAAGTTACTAAAATATTTTGAATCAAAAAGAGCTGGAGTTGGATCAAGTGGAGCAAGGTTGGTATTGCCTCCACTGCGTGGACAATTG
GCTTTGCGTTGGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E304182] | SGN-U576374 | Tomato 200607 | Build 2 | 23 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T116200 [Download] [View] | Facility Assigned ID: TRXAU60TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.929 | Expected Error Rate: 0.0014 | Quality Trim Threshold: 14.5 |
Working
