EST details — SGN-E305580
| Search information |
| Request: 305580 | Match: SGN-E305580 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C93245 | Clone name: cLEX-14-C12 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180073 [TUS-33-G15] | Trace: SGN-T186485 | EST: SGN-E374033 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180073 [TUS-33-G15] | Trace: SGN-T186486 | EST: SGN-E374034 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E305580 | Length: 636 bp (888 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E305580 [] (trimmed)
GAAACCAAAGAACTATAGAGATATACTATGGGTTCTCTAACAACTCCACCAAAACTACTAGTAGTAGATTTCAACAATGAAGAATTAAGGCCAGG
CACAACTACTTGGGAATCTACCTGTAAAGAAATTAGACATGCCTTTGAAAACCATGGTTGTTTCATAGCACTTTATGACAAAATTTCACCACAAC
TTCAAAAATCCATTTTTCAAGATAATTCACAACAATTATTTGAACTTCCTTTAGAGAGAAAAGTCCTAAACATTAGTGAAAAGCCTTATCATGGT
TATGTTGGCCAAATTTCATTTCTACCTAATCATGAGGCTTTTGGTATTGATTATGCAACTACTTCTCAAGGTATTCAAACCTTTTCCAACCTCAT
GTGGCCACAAGGAAATGACTCTTTCTGTGAGAGTTCGTTGATGTTTTCCAAGATTGTGGCGGCGTTGGACAACAAGGTTGTTAGAATGTTATTTG
AGAGCTATGGAATCACAAAAAATTGTGAATCATATGTTGAATCAACCACATATCTCCTTAGATATTTGAAATATAACACTCCAAAGACTAAGGAA
ACTAGCATGGTGTTTCCCCCTCATACCGATAAAACGTTCACTACCATACTATACCAAAATCACATT
CACAACTACTTGGGAATCTACCTGTAAAGAAATTAGACATGCCTTTGAAAACCATGGTTGTTTCATAGCACTTTATGACAAAATTTCACCACAAC
TTCAAAAATCCATTTTTCAAGATAATTCACAACAATTATTTGAACTTCCTTTAGAGAGAAAAGTCCTAAACATTAGTGAAAAGCCTTATCATGGT
TATGTTGGCCAAATTTCATTTCTACCTAATCATGAGGCTTTTGGTATTGATTATGCAACTACTTCTCAAGGTATTCAAACCTTTTCCAACCTCAT
GTGGCCACAAGGAAATGACTCTTTCTGTGAGAGTTCGTTGATGTTTTCCAAGATTGTGGCGGCGTTGGACAACAAGGTTGTTAGAATGTTATTTG
AGAGCTATGGAATCACAAAAAATTGTGAATCATATGTTGAATCAACCACATATCTCCTTAGATATTTGAAATATAACACTCCAAAGACTAAGGAA
ACTAGCATGGTGTTTCCCCCTCATACCGATAAAACGTTCACTACCATACTATACCAAAATCACATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E305580] | SGN-U562860 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T118066 [Download] [View] | Facility Assigned ID: TRXCB18TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0100 | Quality Trim Threshold: 14.5 |
Working
