EST details — SGN-E306005
| Search information |
| Request: 306005 | Match: SGN-E306005 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C96685 | Clone name: cLEY-17-B12 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192985 [TUS-67-A15] | Trace: SGN-T345488 | EST: SGN-E544613 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192985 [TUS-67-A15] | Trace: SGN-T345489 | EST: SGN-E544614 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E306005 | Length: 617 bp (890 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E306005 [] (trimmed)
GTGAAAGTACCTGAAAACGATCCGACTCACTCCAATTCCCTACTCCTTCAATCTCTTCTTGATTCCATTCCCCACACCCAAAGCTTCAAAGGCAA
ATGGTCTTTAATCAGAACCAAACTCTCTACCCTTCAGAGTCACCTTTCTGACCTCTCTACTGCCCCCATCAACGCTTTCCACAATCCACTTTACA
ATGACCTCCTTCAGTCGCTGTCTGTCACTCTAAAGGATGCTTTTGCTCTTTCATCCATTTGCCACAGTGCGAACCCGCCTGAAGGTAAACTCAAG
ACCCAGAATGATATTGATTCCGTTGCTGCAAAAATTGATAACCATGTGAGGGATTTGGAGGTTCTTGTTAAGAATGGGGTTCTTCAAGAAAACGG
TGCTGTTTCGACCAATATTACATCGAAGAGGGAGACTATACGGGCGGAATCGAGGAATCTGATAACACGGCTTCAGATCGGGACGACTGAGTCGA
AGAACTCGGTTTTGGATTCGTTACTTGGGTTGTTACAGGAAGATGACAAGAATGTATTGATTGCAGTAGCTCAAGGGATTGTTCCGGTGCTTGTG
CGGTTACTCGATTCCAGCTCTTCGCCGGAGATCAAGGAGAAGACAGT
ATGGTCTTTAATCAGAACCAAACTCTCTACCCTTCAGAGTCACCTTTCTGACCTCTCTACTGCCCCCATCAACGCTTTCCACAATCCACTTTACA
ATGACCTCCTTCAGTCGCTGTCTGTCACTCTAAAGGATGCTTTTGCTCTTTCATCCATTTGCCACAGTGCGAACCCGCCTGAAGGTAAACTCAAG
ACCCAGAATGATATTGATTCCGTTGCTGCAAAAATTGATAACCATGTGAGGGATTTGGAGGTTCTTGTTAAGAATGGGGTTCTTCAAGAAAACGG
TGCTGTTTCGACCAATATTACATCGAAGAGGGAGACTATACGGGCGGAATCGAGGAATCTGATAACACGGCTTCAGATCGGGACGACTGAGTCGA
AGAACTCGGTTTTGGATTCGTTACTTGGGTTGTTACAGGAAGATGACAAGAATGTATTGATTGCAGTAGCTCAAGGGATTGTTCCGGTGCTTGTG
CGGTTACTCGATTCCAGCTCTTCGCCGGAGATCAAGGAGAAGACAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E306005] | SGN-U574123 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T120289 [Download] [View] | Facility Assigned ID: TRYCP06TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0043 | Quality Trim Threshold: 14.5 |
Working
