EST details — SGN-E306213
Search information |
Request: 306213 | Match: SGN-E306213 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C95873 | Clone name: cLEY-13-J9 |
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Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C192832 [TUS-66-K6] | Trace: SGN-T345226 | EST: SGN-E544351 | Direction: 5' | Facility: INRA (MWG) |
Clone: SGN-C192832 [TUS-66-K6] | Trace: SGN-T349903 | EST: SGN-E549028 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E306213 | Length: 475 bp (948 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E306213 [] (trimmed)
GATGATGGGTCGCTACACCGAGCCCATTGAGGACTGCCCTTGCGGTAACACCATCGGTCTCGTCGGCATTGACCAGTTCCTCGTCAAGTCCGGCA
CCATCACCACCTCCGAGGTTGCGCACAACATCAAGGTCATGAAGTTCTCCGTGTCCCCCGTCGTGCGTGTCGCCGTCGAGCCCAAGAACCCCGCC
GATCTGCCCAAGCTCGTCGAGGGTCTTAAGCGCCTCTCCAAGTCCGACCCCTGCGTGCAGTGCTTCATGGAGGAGTCTGGCGAGCACATCGTCGC
TGGTGCCGGTGAGCTCCACCTCGAGATCTGCCTGAAGGATCTCCAGGACGACTTCATGAACGGCGTCGAGCTCAAGATCACCGACCCCATCGTGT
CTTACCGCGAGACCGTCACCGCTCCCTCGGACCACGTCGTCCTCTCCAAGTCGCCCAACAAGCACAACCGTATCTACCTCAAGGCCGAGCCCATG
CCATCACCACCTCCGAGGTTGCGCACAACATCAAGGTCATGAAGTTCTCCGTGTCCCCCGTCGTGCGTGTCGCCGTCGAGCCCAAGAACCCCGCC
GATCTGCCCAAGCTCGTCGAGGGTCTTAAGCGCCTCTCCAAGTCCGACCCCTGCGTGCAGTGCTTCATGGAGGAGTCTGGCGAGCACATCGTCGC
TGGTGCCGGTGAGCTCCACCTCGAGATCTGCCTGAAGGATCTCCAGGACGACTTCATGAACGGCGTCGAGCTCAAGATCACCGACCCCATCGTGT
CTTACCGCGAGACCGTCACCGCTCCCTCGGACCACGTCGTCCTCTCCAAGTCGCCCAACAAGCACAACCGTATCTACCTCAAGGCCGAGCCCATG
Unigenes |
Current Unigene builds | |||||
[SGN-E306213] | SGN-U571908 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T119391 [Download] [View] | Facility Assigned ID: TRYBY53TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.948 | Expected Error Rate: 0.0131 | Quality Trim Threshold: 14.5 |