EST details — SGN-E306814
Search information |
Request: 306814 | Match: SGN-E306814 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C95339 | Clone name: cLEY-11-I10 |
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Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C192731 [TUS-66-G1] | Trace: SGN-T345053 | EST: SGN-E544178 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E306814 | Length: 600 bp (851 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E306814 [] (trimmed)
GGGCTGATGGATCGAGGTCAAGGGAAGAAGCTTTTGATGGTCACATGGCAATTGGCAGGGTTTTGTATGATCAACATTTGTTTAAGGAAGCACTG
GTGAGCTTTAAGAGAGCTTGTGAGTTGCAGCCTGCTGATGTTAGGCCACATTTCAGGGCTGGCAATTGTTTGTATGTGCTCGGGAGACATAGTGA
GTCGAAAGAGGAGTTCTTGCTGGCATTGGAGGCTGCTGAAGCTGGTGGCAGTCAGTGGGCTTATTTGCTTCCTCAGATTCATGTGAATTTGGGAA
TTGCTCTTGAAGGCGAAGGTATGGTTATAAGTGCCTGTGAACATTATAGAGAGGCTGCTATTTTGTGTCCAACTCATTTTAGAGCTTTGAAACTT
TTGGGTAGTGCACTTTTTGGCGTGGGTGAGTATAAGGCAGCTGTTAAGGCATTATAAGAGGCCATTTATATGAAGAGTGACTATGCTGATGCACA
TTGTGATCTTGCTTCTGCATTGCACGCAATGGGTGATGATGATAATGCTATTAAGGAGTTTCAGAGAGCTATTGATTTGAAACCTGGTCATGTTG
ATGCCTTGTACAATTTAAGTGGACTTTACA
GTGAGCTTTAAGAGAGCTTGTGAGTTGCAGCCTGCTGATGTTAGGCCACATTTCAGGGCTGGCAATTGTTTGTATGTGCTCGGGAGACATAGTGA
GTCGAAAGAGGAGTTCTTGCTGGCATTGGAGGCTGCTGAAGCTGGTGGCAGTCAGTGGGCTTATTTGCTTCCTCAGATTCATGTGAATTTGGGAA
TTGCTCTTGAAGGCGAAGGTATGGTTATAAGTGCCTGTGAACATTATAGAGAGGCTGCTATTTTGTGTCCAACTCATTTTAGAGCTTTGAAACTT
TTGGGTAGTGCACTTTTTGGCGTGGGTGAGTATAAGGCAGCTGTTAAGGCATTATAAGAGGCCATTTATATGAAGAGTGACTATGCTGATGCACA
TTGTGATCTTGCTTCTGCATTGCACGCAATGGGTGATGATGATAATGCTATTAAGGAGTTTCAGAGAGCTATTGATTTGAAACCTGGTCATGTTG
ATGCCTTGTACAATTTAAGTGGACTTTACA
Unigenes |
Current Unigene builds | |||||
[SGN-E306814] | SGN-U568667 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T118738 [Download] [View] | Facility Assigned ID: TRYBP53TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.950 | Expected Error Rate: 0.0059 | Quality Trim Threshold: 14.5 |