EST details — SGN-E307868
| Search information |
| Request: 307868 | Match: SGN-E307868 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C97265 | Clone name: cLEY-20-I15 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193091 [TUS-67-F1] | Trace: SGN-T345670 | EST: SGN-E544795 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193091 [TUS-67-F1] | Trace: SGN-T345671 | EST: SGN-E544796 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E307868 | Length: 513 bp (982 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E307868 [] (trimmed)
GATTCCTTCTTCAAGTAACCAATTTTTATTTTTATTTTTTTGAAATATTTCATATATTATTATAATGTGTCCAACTATGAATATTTTGGCAACTG
AAAAAATTAAGGAAAATTATGAGGGGAAAAATGAGTGTAGATATCAAAAAGGAGTTAGACATTTATGTGAAAGTGGAATTACTAAAATTCCAAAA
AAAAATATATTTTGCCAATTTCAGATAGGCCTTTAATTGTGAAAAAAGAAGAAAAAATTGAAGAAAATCTCAATTTGCCTATTATTGATTTTGCT
CAATTGCAAGGCCCCAATAGATCTCAAGTTCTCAAATCACTTGCCAAAGCTTGTGAAGAATATGGTTTTTTTCAGTTGGTGAATCATGGTATACA
TAGTGACACAATTCAACACATCATTGAAGTTGGCAAGAAATTCTTTGAACTTTCCCTTTGAAGAAAGAGCAAAATACATGTCTATTGACATGCAA
GCACCAGTAAGAATTGGGCCAAGTTTCAATCAAAATAA
AAAAAATTAAGGAAAATTATGAGGGGAAAAATGAGTGTAGATATCAAAAAGGAGTTAGACATTTATGTGAAAGTGGAATTACTAAAATTCCAAAA
AAAAATATATTTTGCCAATTTCAGATAGGCCTTTAATTGTGAAAAAAGAAGAAAAAATTGAAGAAAATCTCAATTTGCCTATTATTGATTTTGCT
CAATTGCAAGGCCCCAATAGATCTCAAGTTCTCAAATCACTTGCCAAAGCTTGTGAAGAATATGGTTTTTTTCAGTTGGTGAATCATGGTATACA
TAGTGACACAATTCAACACATCATTGAAGTTGGCAAGAAATTCTTTGAACTTTCCCTTTGAAGAAAGAGCAAAATACATGTCTATTGACATGCAA
GCACCAGTAAGAATTGGGCCAAGTTTCAATCAAAATAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E307868] | SGN-U562670 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T120678 [Download] [View] | Facility Assigned ID: TRYCY56TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.893 | Expected Error Rate: 0.0092 | Quality Trim Threshold: 14.5 |
Working
