EST details — SGN-E307868
Search information |
Request: 307868 | Match: SGN-E307868 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C97265 | Clone name: cLEY-20-I15 |
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Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193091 [TUS-67-F1] | Trace: SGN-T345670 | EST: SGN-E544795 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C193091 [TUS-67-F1] | Trace: SGN-T345671 | EST: SGN-E544796 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E307868 | Length: 513 bp (982 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E307868 [] (trimmed)
GATTCCTTCTTCAAGTAACCAATTTTTATTTTTATTTTTTTGAAATATTTCATATATTATTATAATGTGTCCAACTATGAATATTTTGGCAACTG
AAAAAATTAAGGAAAATTATGAGGGGAAAAATGAGTGTAGATATCAAAAAGGAGTTAGACATTTATGTGAAAGTGGAATTACTAAAATTCCAAAA
AAAAATATATTTTGCCAATTTCAGATAGGCCTTTAATTGTGAAAAAAGAAGAAAAAATTGAAGAAAATCTCAATTTGCCTATTATTGATTTTGCT
CAATTGCAAGGCCCCAATAGATCTCAAGTTCTCAAATCACTTGCCAAAGCTTGTGAAGAATATGGTTTTTTTCAGTTGGTGAATCATGGTATACA
TAGTGACACAATTCAACACATCATTGAAGTTGGCAAGAAATTCTTTGAACTTTCCCTTTGAAGAAAGAGCAAAATACATGTCTATTGACATGCAA
GCACCAGTAAGAATTGGGCCAAGTTTCAATCAAAATAA
AAAAAATTAAGGAAAATTATGAGGGGAAAAATGAGTGTAGATATCAAAAAGGAGTTAGACATTTATGTGAAAGTGGAATTACTAAAATTCCAAAA
AAAAATATATTTTGCCAATTTCAGATAGGCCTTTAATTGTGAAAAAAGAAGAAAAAATTGAAGAAAATCTCAATTTGCCTATTATTGATTTTGCT
CAATTGCAAGGCCCCAATAGATCTCAAGTTCTCAAATCACTTGCCAAAGCTTGTGAAGAATATGGTTTTTTTCAGTTGGTGAATCATGGTATACA
TAGTGACACAATTCAACACATCATTGAAGTTGGCAAGAAATTCTTTGAACTTTCCCTTTGAAGAAAGAGCAAAATACATGTCTATTGACATGCAA
GCACCAGTAAGAATTGGGCCAAGTTTCAATCAAAATAA
Unigenes |
Current Unigene builds | |||||
[SGN-E307868] | SGN-U562670 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T120678 [Download] [View] | Facility Assigned ID: TRYCY56TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.893 | Expected Error Rate: 0.0092 | Quality Trim Threshold: 14.5 |