EST details — SGN-E308440

Search information 
Request: 308440Match: SGN-E308440
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C98066Clone name: cLEY-25-P8
cartOrder Clone
Library Name: cLEYOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: root
Development Stage: pre-anthesis/pre-fruit loading

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C193250 [TUS-67-L16] Trace: SGN-T345944 EST: SGN-E545069 Direction: 5' Facility: INRA (MWG)
Clone: SGN-C193250 [TUS-67-L16] Trace: SGN-T350021 EST: SGN-E549146 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E308440Length: 170 bp (855 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E308440 [] (trimmed) GACGCAGTCAAGTTGGACACAATAGAAAGACATGTTCAAATTATCCCGTGCAAAAATAATGATTTCGTAATGTTACATTTGTTATTGTGTTGTTT
TGAATGTTAAAAACACGTTTTGTTTTATTGAGTGCAGTTGTTATCATTGACATTTATAAAGTTTGATTTCGTACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E308440] SGN-U600023 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T121703 [Download] [View] Facility Assigned ID: TRYDV88TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.878 Expected Error Rate: 0.0006 Quality Trim Threshold: 12.5