EST details — SGN-E309100
Search information |
Request: 309100 | Match: SGN-E309100 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C99981 | Clone name: cLEZ-1-O23 |
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Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C99981 [cLEZ-1-O23] | Trace: SGN-T121789 | EST: SGN-E309099 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E309100 | Length: 488 bp (627 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E309100 [] (trimmed)
CGTTGCAAATCACCTAACCCAATAACAGAACAACTAAACACCACTTCTCTGCGATCTATTCCCGTCGCCGGCAGCGTCGTTTTTCATGCAGCCAC
CACCGTAATTCGCCGTCGTTTCCGAACTCACAACCTACTATCTCCTCCGCCATCTCCGACGACTTGCTCATGTACGCATAATTGCCAGCTAAGCA
AACACTGATTGAAGAAACTCCATAGGTTTCACTCTTAACCTTCTGAATCAAGGCCGCCGGCATTTCCCCCAATTCCTCACACTCAAAATTCTCCG
TATTCACTTTCCAAATTTTAACTCCGGCCACATTTTCGGACTCTCCGATCATCCCAATCAGGATCAATCGATTGTTTGCGAACCCGATAATTGAG
TGAAAAATACGTGGATCCGGCTTTAACTCATACGGACCTGACCAATTCTTCGTTTTCGGATGGAAACAGTAAGTAACTCCGGTGAATTTCTCTGC
AACGACGAGTTTA
CACCGTAATTCGCCGTCGTTTCCGAACTCACAACCTACTATCTCCTCCGCCATCTCCGACGACTTGCTCATGTACGCATAATTGCCAGCTAAGCA
AACACTGATTGAAGAAACTCCATAGGTTTCACTCTTAACCTTCTGAATCAAGGCCGCCGGCATTTCCCCCAATTCCTCACACTCAAAATTCTCCG
TATTCACTTTCCAAATTTTAACTCCGGCCACATTTTCGGACTCTCCGATCATCCCAATCAGGATCAATCGATTGTTTGCGAACCCGATAATTGAG
TGAAAAATACGTGGATCCGGCTTTAACTCATACGGACCTGACCAATTCTTCGTTTTCGGATGGAAACAGTAAGTAACTCCGGTGAATTTCTCTGC
AACGACGAGTTTA
Unigenes |
Current Unigene builds | |||||
[SGN-E309100] | SGN-U574886 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T121790 [Download] [View] | Facility Assigned ID: TRZAA96TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.956 | Expected Error Rate: 0.0095 | Quality Trim Threshold: 20.5 |