EST details — SGN-E309339
| Search information |
| Request: 309339 | Match: SGN-E309339 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C97527 | Clone name: cLEY-22-A19 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193144 [TUS-67-H6] | Trace: SGN-T345762 | EST: SGN-E544887 | Direction: 5' | Facility: INRA (MWG) |
| Clone: SGN-C193144 [TUS-67-H6] | Trace: SGN-T349991 | EST: SGN-E549116 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E309339 | Length: 297 bp (997 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E309339 [] (trimmed)
GAATGTGTGGGAAATTAATAGAGATTCTACTTTTTGGGAGGATCCCTTAATGTTTAAGCCTGAGAGGTTTTGGCATTCAAATTTATACGTGCGAG
GACAAGATTTTGAACTGATCCCATTTGGTGCGGGTAGAAGAATGTGCCCTGCCTTGCCACTTGCATTGCGAATGATTCCAGTCATGTTGGGCTCA
CTCTTGAATTCCTTCAATTGGAAACTCGAGGCAGGCATTAGACCAGAAGACCTAGACATGGAGGAAAAATTTGGTTTGGCTTTAATCAAAGCTCA
TCCTTTGCGGGC
GACAAGATTTTGAACTGATCCCATTTGGTGCGGGTAGAAGAATGTGCCCTGCCTTGCCACTTGCATTGCGAATGATTCCAGTCATGTTGGGCTCA
CTCTTGAATTCCTTCAATTGGAAACTCGAGGCAGGCATTAGACCAGAAGACCTAGACATGGAGGAAAAATTTGGTTTGGCTTTAATCAAAGCTCA
TCCTTTGCGGGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E309339] | SGN-U571339 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T121044 [Download] [View] | Facility Assigned ID: TRYDG10TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0195 | Quality Trim Threshold: 12.5 |
Working
