EST details — SGN-E310094
Search information |
Request: 310094 | Match: SGN-E310094 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C100426 | Clone name: cLEZ-8-D12 |
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Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193329 [TUS-67-O23] | Trace: SGN-T346079 | EST: SGN-E545204 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C193329 [TUS-67-O23] | Trace: SGN-T346080 | EST: SGN-E545205 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E310094 | Length: 570 bp (881 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E310094 [] (trimmed)
CATTGTTTTTACATGTGAGTTCTCAATCAGAAGATTGCCAAGAAGTTATCGTTGGTTTAGCACCTTGCTTACAATACATACAAGGAAATGCTACA
ACTCCATCGTCAGGTTGTTGCACACAGCTTGCTACTATAGTCAAGACGCGACCGCGATGCGTGTGTCATGTTTTTAGTGGAGTTAATGTCAATCA
AACACTGGCTATGGCTCTTCCTAAAGCTTGTAATGTTCATATCACTCCCTCTCTTACACTATGTCAAGCTACTTCCGCAGCTGGTTCTCCACTCT
CTTCATCCACTCCTACAGGAGAGAGATCAAGAACTTCACAAAGTGAGGATTCATCAAGAGGATACTCATTGAAGCTCCCATATTACTCTCTTTTA
TTTACCCTTGTTATACCCACTTTCTCATTGTTCAACACCATCTAAACTCAAAAGCACGTGTGAAAAGTCAGAAGGATCAATAATGTTCTTACTTA
CCTTTCAATGTAATTCACGCTTTGTGGTTTGATTCTTTGCATCTTTTAAACAATAGAGTCAGGGTTCATGGTTCAGTTCGGATAATTGTTTCTAT
ACTCCATCGTCAGGTTGTTGCACACAGCTTGCTACTATAGTCAAGACGCGACCGCGATGCGTGTGTCATGTTTTTAGTGGAGTTAATGTCAATCA
AACACTGGCTATGGCTCTTCCTAAAGCTTGTAATGTTCATATCACTCCCTCTCTTACACTATGTCAAGCTACTTCCGCAGCTGGTTCTCCACTCT
CTTCATCCACTCCTACAGGAGAGAGATCAAGAACTTCACAAAGTGAGGATTCATCAAGAGGATACTCATTGAAGCTCCCATATTACTCTCTTTTA
TTTACCCTTGTTATACCCACTTTCTCATTGTTCAACACCATCTAAACTCAAAAGCACGTGTGAAAAGTCAGAAGGATCAATAATGTTCTTACTTA
CCTTTCAATGTAATTCACGCTTTGTGGTTTGATTCTTTGCATCTTTTAAACAATAGAGTCAGGGTTCATGGTTCAGTTCGGATAATTGTTTCTAT
Unigenes |
Current Unigene builds | |||||
[SGN-E310094] | SGN-U566253 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T122060 [Download] [View] | Facility Assigned ID: TRZBF18TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.968 | Expected Error Rate: 0.0081 | Quality Trim Threshold: 12.5 |