EST details — SGN-E310094
| Search information |
| Request: 310094 | Match: SGN-E310094 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C100426 | Clone name: cLEZ-8-D12 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193329 [TUS-67-O23] | Trace: SGN-T346079 | EST: SGN-E545204 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193329 [TUS-67-O23] | Trace: SGN-T346080 | EST: SGN-E545205 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E310094 | Length: 570 bp (881 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E310094 [] (trimmed)
CATTGTTTTTACATGTGAGTTCTCAATCAGAAGATTGCCAAGAAGTTATCGTTGGTTTAGCACCTTGCTTACAATACATACAAGGAAATGCTACA
ACTCCATCGTCAGGTTGTTGCACACAGCTTGCTACTATAGTCAAGACGCGACCGCGATGCGTGTGTCATGTTTTTAGTGGAGTTAATGTCAATCA
AACACTGGCTATGGCTCTTCCTAAAGCTTGTAATGTTCATATCACTCCCTCTCTTACACTATGTCAAGCTACTTCCGCAGCTGGTTCTCCACTCT
CTTCATCCACTCCTACAGGAGAGAGATCAAGAACTTCACAAAGTGAGGATTCATCAAGAGGATACTCATTGAAGCTCCCATATTACTCTCTTTTA
TTTACCCTTGTTATACCCACTTTCTCATTGTTCAACACCATCTAAACTCAAAAGCACGTGTGAAAAGTCAGAAGGATCAATAATGTTCTTACTTA
CCTTTCAATGTAATTCACGCTTTGTGGTTTGATTCTTTGCATCTTTTAAACAATAGAGTCAGGGTTCATGGTTCAGTTCGGATAATTGTTTCTAT
ACTCCATCGTCAGGTTGTTGCACACAGCTTGCTACTATAGTCAAGACGCGACCGCGATGCGTGTGTCATGTTTTTAGTGGAGTTAATGTCAATCA
AACACTGGCTATGGCTCTTCCTAAAGCTTGTAATGTTCATATCACTCCCTCTCTTACACTATGTCAAGCTACTTCCGCAGCTGGTTCTCCACTCT
CTTCATCCACTCCTACAGGAGAGAGATCAAGAACTTCACAAAGTGAGGATTCATCAAGAGGATACTCATTGAAGCTCCCATATTACTCTCTTTTA
TTTACCCTTGTTATACCCACTTTCTCATTGTTCAACACCATCTAAACTCAAAAGCACGTGTGAAAAGTCAGAAGGATCAATAATGTTCTTACTTA
CCTTTCAATGTAATTCACGCTTTGTGGTTTGATTCTTTGCATCTTTTAAACAATAGAGTCAGGGTTCATGGTTCAGTTCGGATAATTGTTTCTAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E310094] | SGN-U566253 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T122060 [Download] [View] | Facility Assigned ID: TRZBF18TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0081 | Quality Trim Threshold: 12.5 |
Working
