EST details — SGN-E310981
| Search information |
| Request: 310981 | Match: SGN-E310981 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C99369 | Clone name: cLEZ-17-E1 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193525 [TUS-68-H3] | Trace: SGN-T346416 | EST: SGN-E545541 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193525 [TUS-68-H3] | Trace: SGN-T346417 | EST: SGN-E545542 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E310981 | Length: 571 bp (878 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E310981 [] (trimmed)
GCAAAATTTGAACCTACATTAATTTTCTCCATTTTTATAGCAAATTTCTTCCATAAATGGCTGGTAGAGGCAAAACCCTAGGTTCAGGAACAGCA
AAAAAGGCTACTTCTCGTAGTAGCAAAGCTGGTCTTCAGTTTCCGGTTGGTCGTATTGCTCGGTTTTTGAAAGCCGGGAAGTATGCTGAACGTGT
CGGTGCCGGAGCTCCGGTTTATCTAGCTGCTGTTCTGGAGTACCTTGCTGCTGAGGTTCTTGAGTTAGCTGGAAATGCAGCAAGGGACAACAAGA
AGACTAGGATCGTTCCGAGGCATATTCAATTGGCACTGAGGAACGATGAGGAACTAAGCAAACTTCTCGGAGATGTAACGATTGCCAATGGCGGT
GTGATGCCCAACATTCACAACCTTCTGCTTCCAAAGAAAACCGGTGGTTCAAAGCCATCTGCTGATGAAGATTAAACATATTCAAGACTTGGTTT
TTCTTAGTTTATAGCTCTTTGTTCTTTTTCTGGAATAGTATTAAGGATTTGCTAGTGTTTCTTTAGGTGTTTAGTAGATTTTGGGGTTTATGTTT
T
AAAAAGGCTACTTCTCGTAGTAGCAAAGCTGGTCTTCAGTTTCCGGTTGGTCGTATTGCTCGGTTTTTGAAAGCCGGGAAGTATGCTGAACGTGT
CGGTGCCGGAGCTCCGGTTTATCTAGCTGCTGTTCTGGAGTACCTTGCTGCTGAGGTTCTTGAGTTAGCTGGAAATGCAGCAAGGGACAACAAGA
AGACTAGGATCGTTCCGAGGCATATTCAATTGGCACTGAGGAACGATGAGGAACTAAGCAAACTTCTCGGAGATGTAACGATTGCCAATGGCGGT
GTGATGCCCAACATTCACAACCTTCTGCTTCCAAAGAAAACCGGTGGTTCAAAGCCATCTGCTGATGAAGATTAAACATATTCAAGACTTGGTTT
TTCTTAGTTTATAGCTCTTTGTTCTTTTTCTGGAATAGTATTAAGGATTTGCTAGTGTTTCTTTAGGTGTTTAGTAGATTTTGGGGTTTATGTTT
T
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E310981] | SGN-U577216 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T123406 [Download] [View] | Facility Assigned ID: TRZCM25TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 12.5 |
Working
