EST details — SGN-E310981
Search information |
Request: 310981 | Match: SGN-E310981 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C99369 | Clone name: cLEZ-17-E1 |
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Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193525 [TUS-68-H3] | Trace: SGN-T346416 | EST: SGN-E545541 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C193525 [TUS-68-H3] | Trace: SGN-T346417 | EST: SGN-E545542 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E310981 | Length: 571 bp (878 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E310981 [] (trimmed)
GCAAAATTTGAACCTACATTAATTTTCTCCATTTTTATAGCAAATTTCTTCCATAAATGGCTGGTAGAGGCAAAACCCTAGGTTCAGGAACAGCA
AAAAAGGCTACTTCTCGTAGTAGCAAAGCTGGTCTTCAGTTTCCGGTTGGTCGTATTGCTCGGTTTTTGAAAGCCGGGAAGTATGCTGAACGTGT
CGGTGCCGGAGCTCCGGTTTATCTAGCTGCTGTTCTGGAGTACCTTGCTGCTGAGGTTCTTGAGTTAGCTGGAAATGCAGCAAGGGACAACAAGA
AGACTAGGATCGTTCCGAGGCATATTCAATTGGCACTGAGGAACGATGAGGAACTAAGCAAACTTCTCGGAGATGTAACGATTGCCAATGGCGGT
GTGATGCCCAACATTCACAACCTTCTGCTTCCAAAGAAAACCGGTGGTTCAAAGCCATCTGCTGATGAAGATTAAACATATTCAAGACTTGGTTT
TTCTTAGTTTATAGCTCTTTGTTCTTTTTCTGGAATAGTATTAAGGATTTGCTAGTGTTTCTTTAGGTGTTTAGTAGATTTTGGGGTTTATGTTT
T
AAAAAGGCTACTTCTCGTAGTAGCAAAGCTGGTCTTCAGTTTCCGGTTGGTCGTATTGCTCGGTTTTTGAAAGCCGGGAAGTATGCTGAACGTGT
CGGTGCCGGAGCTCCGGTTTATCTAGCTGCTGTTCTGGAGTACCTTGCTGCTGAGGTTCTTGAGTTAGCTGGAAATGCAGCAAGGGACAACAAGA
AGACTAGGATCGTTCCGAGGCATATTCAATTGGCACTGAGGAACGATGAGGAACTAAGCAAACTTCTCGGAGATGTAACGATTGCCAATGGCGGT
GTGATGCCCAACATTCACAACCTTCTGCTTCCAAAGAAAACCGGTGGTTCAAAGCCATCTGCTGATGAAGATTAAACATATTCAAGACTTGGTTT
TTCTTAGTTTATAGCTCTTTGTTCTTTTTCTGGAATAGTATTAAGGATTTGCTAGTGTTTCTTTAGGTGTTTAGTAGATTTTGGGGTTTATGTTT
T
Unigenes |
Current Unigene builds | |||||
[SGN-E310981] | SGN-U577216 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T123406 [Download] [View] | Facility Assigned ID: TRZCM25TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 12.5 |