EST details — SGN-E330339

Search information 
Request: 330339Match: SGN-E330339
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C133079Clone name: cTOD-4-L14
cartOrder Clone
Library Name: cTODOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: flowers
Development Stage: anthesis-stage flowers from full grown plants

Microarray: Alias clone SGN-C182931 is on microarray TOM1: SGN-S1-1-8.2.5.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C182931 [TUS-40-N17] Trace: SGN-T195459 EST: SGN-E394133 Direction: 5' Facility: INRA
Clone: SGN-C182931 [TUS-40-N17] Trace: SGN-T199565 EST: SGN-E398239 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E330339Length: 618 bp (873 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E330339 [] (trimmed) GCCGGGAGAGAGATAGTGAACGGGGAAGAGATAAGGAACGAGATAGGGAGACTGAGCGGGTGAGGAGCAGCAAGGATAAGGATAGTGAGAAGGTA
AGAGATAGGAAAAAGGAAAAGGAAAGAGGTAGTAGAGATGGAGCTGAGAAGGAGAAGGGGAGAGATAGAGCTAAAGAAAAGGGGAAGGAAGTGGA
TGAGGATGATAAGGAGAGGTCAAGAGATAAAGATAGGAGCAGCCGTAGGCAGCGAGATGAGGGTCATGATAGGAGTAAGGACAAGGACAGGCGGA
AGGATGAAGATTCTGATTATCGCTATGCAGCTAAGCAGGAAATTGTTGTTTCTCATGAAGATGAGGAGAGGTCACATAACAATGCAGTTGAAACA
GGTGGAGCACAATCTGCTGCTGCCGCTTCGGAGCTGGAGGAACGCATTCTGAAGATGAAGGAAGAGAGGTTGAAGAAAAAATCAGAAGGTGCTTC
TGAGGTGTTGGAGTGGGTTAGCAAGAGCCGAAAGATTGAGGAGATAAGGAATGCTGAGAAGGAGAAAGCCTTACAGCTTTCGAAGATTTTTGAAG
AGCAGGACAAGATGAATGAAGAAGAAAGTGATGATGAGGAGAATGCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E330339] SGN-U570591 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T142504 [Download] [View] Facility Assigned ID: TFDAP67TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.885 Expected Error Rate: 0.0093 Quality Trim Threshold: 14.5