EST details — SGN-E340842
| Search information |
| Request: 340842 | Match: SGN-E340842 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C147793 | Clone name: cTOF-5-P9 |
| ||
| Library Name: cTOF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E340842 | Length: 733 bp (915 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E340842 [] (trimmed)
GCCGAATTGTGTTTCAACTCGCTGCTACGGAGCATTGAGCATTTGCTGCCGCCGGCTGTATCGCTCGCCGCCGTTCAATCCTTCCGAGGATAGAG
CCAACTTTGGCGACCTTGAAAAATAGGTAGCGCTGGGTGTTATTTTGAAGGGAAAAGATAAGCATTATGAGAACAACATTAGTGAGACAGAAGGG
TATCAAGATTTATTGGAAATATTACAGTAGTCTTTGCCATCCCAAGGTGAATGAGACACGTTCTTCAACAAACTTGCGTTCATTTAGCAGCTCCA
ACAAATTCAGCGATTACTCTGATGAATCCGCTGAATCCAACTATCCTCCTCCTCCTGAGCCTATACCAAATAGGCCCTTACGAGCTGATTCCAGG
AGGCCCTTCAATCCATCCCAAAGACAGCATCCAAGCAACAGAAGCAGCCCCAATCATTCTACAACTTTTAGAAGATCCAGTGAGAACAATGAAAG
TCAAATGAAATCCCAGGATAGTGAAGATTTTCTGAAAAGATTTCAGCTTGGATTTGATCGTAAAGAGGAAAACCCAAACACAAACCCCAAAGCTG
AAAGTAGAGACTGTCCTGTTTCAGAGGCACCTNCAGCTCCACCAGAAGATGCTGATGAGATATTCAAGAAAATGAAAGAAACTGGCTTAATACCT
AATGCTGTAGCAATGCTTGATGGGCTCTGCAGGGACGCTTGGTACAGGAAGCGATGAAGCTCTTTGGC
CCAACTTTGGCGACCTTGAAAAATAGGTAGCGCTGGGTGTTATTTTGAAGGGAAAAGATAAGCATTATGAGAACAACATTAGTGAGACAGAAGGG
TATCAAGATTTATTGGAAATATTACAGTAGTCTTTGCCATCCCAAGGTGAATGAGACACGTTCTTCAACAAACTTGCGTTCATTTAGCAGCTCCA
ACAAATTCAGCGATTACTCTGATGAATCCGCTGAATCCAACTATCCTCCTCCTCCTGAGCCTATACCAAATAGGCCCTTACGAGCTGATTCCAGG
AGGCCCTTCAATCCATCCCAAAGACAGCATCCAAGCAACAGAAGCAGCCCCAATCATTCTACAACTTTTAGAAGATCCAGTGAGAACAATGAAAG
TCAAATGAAATCCCAGGATAGTGAAGATTTTCTGAAAAGATTTCAGCTTGGATTTGATCGTAAAGAGGAAAACCCAAACACAAACCCCAAAGCTG
AAAGTAGAGACTGTCCTGTTTCAGAGGCACCTNCAGCTCCACCAGAAGATGCTGATGAGATATTCAAGAAAATGAAAGAAACTGGCTTAATACCT
AATGCTGTAGCAATGCTTGATGGGCTCTGCAGGGACGCTTGGTACAGGAAGCGATGAAGCTCTTTGGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E340842] | SGN-U571902 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T153865 [Download] [View] | Facility Assigned ID: TOFAS89THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0089 | Quality Trim Threshold: 14.5 |
Working
