SGN ID: SGN-C143461 | Clone name: cTOF-23-D5 |  | Order Clone |
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Library Name: cTOF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants
Microarray: Alias clone
SGN-C184614 is on microarray TOM1: SGN-S1-1-5.4.14.15
There is no map position defined on SGN for this EST or others in the same unigene.
Sequence Id: SGN-E346436 | Length: 650 bp (891 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E346436 [] (trimmed)
GGAGCTTTCAACACTCAAGAGATCGGAAGAAACTGAAATCACACAGAGCCCAAATTTTTCAATAGCTTTTAGTACTATCAGATAATGGCTAGATA
CGACAGAGCGATCACCGTTTTCTCGCCGGACGGCCACTTATTCCAAGTGGAGTACGCCATGGAAGCCGTACGCAAAGGAAACGCCGCCGTCGGTG
TACGTGGAACTGACACTGTTGTCCTCGGCGTCGAGAAGAAGTCCACTCCCAAGCTTCAAGACTCCAGGTCAGTAAGAAAGATAGTGAATCTAGAT
GATCACATTGCGTTGGCGTGTGCTGGGCTGAAAGCAGATGCACGAGTTCTTGTGAATAAAGCACGCATTGAGTGTCAGAGTCATAGGCTTACAGT
TGAAGATCCTGTTACTGTTGAGTACATAACTCGTTACATTGCTGGTCTTCAGCAAAAGTACACCCAAAGTGGTGGGGTGAGGCCATTTGGTCTAT
CCACCTTGATCATTGGTTNTGACCCACACACAGGTGTCCCCTCACTTTACCAAACAGATCCATCAGGTACATTCTCAGCTTGGAAAGCCAATGCG
ACTGGTAGAAACTCCAACTCTACTCGGGAATTCTTGGAGAAGAATTACAAAGAAACATCTGGCCAGGAAACTGTGAAACT
[BLAST] [AA Translate]
SGN-ID: SGN-T158713 [Download] [View] |
Facility Assigned ID: TOFDM15TH
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Submitter: Koni |
Sequencing Facility: TIGR |
Funding Organization: National Science Foundation
Processed By: SGN |
Basecalling Software: phred |
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.990 |
Expected Error Rate: 0.0064 |
Quality Trim Threshold: 14.5 |