EST details — SGN-E354679
| Search information |
| Request: 354679 | Match: SGN-E354679 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C103132 | Clone name: cLHT-5-D14 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193688 [TUS-68-N22] | Trace: SGN-T346696 | EST: SGN-E545821 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193688 [TUS-68-N22] | Trace: SGN-T346697 | EST: SGN-E545822 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E354679 | Length: 302 bp (1002 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E354679 [] (trimmed)
AGTGGCTCTGTTTTCAACTAATCAACTTCAGGACCCCTGTTTTTCTCTTTATCTGCAAAATTTCAAGTAGCATTAAATAAATTTTGCTCATAAAT
TCTTCTTTTCTTCATCTTAAACTTTAAAATACAACAAAAGACACTTGCTTGTAGACAAACTACACCTCCAGGTACTCAATTTCAACTTTTTGTTA
ATACTCATTTTGTTATTTTCTGCTAAATTGTTTACTTTACAATGGGAATTTTGATGTACATAGCAAGATCTGTGTGTATTTGGAGTTGTCTTTTT
GGGATTTCTACTGCATT
TCTTCTTTTCTTCATCTTAAACTTTAAAATACAACAAAAGACACTTGCTTGTAGACAAACTACACCTCCAGGTACTCAATTTCAACTTTTTGTTA
ATACTCATTTTGTTATTTTCTGCTAAATTGTTTACTTTACAATGGGAATTTTGATGTACATAGCAAGATCTGTGTGTATTTGGAGTTGTCTTTTT
GGGATTTCTACTGCATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E354679] | SGN-U578212 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T169895 [Download] [View] | Facility Assigned ID: THTAT19TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.894 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 14.5 |
Working
