EST details — SGN-E356452
Search information |
Request: 356452 | Match: SGN-E356452 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C101629 | Clone name: cLHT-20-I18 |
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Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193865 [TUS-69-F7] | Trace: SGN-T347000 | EST: SGN-E546125 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E356452 | Length: 488 bp (872 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E356452 [] (trimmed)
GATGGAGCTTTAGTTGGCCTACCTGGAGTAGATGGATTGTCAACAGATCAAAGGAAAAGGTTGACGATTGCAGTTGAGCTTGTAGCCAATCCTTC
AATAGTTTTTATGGATGAACCTACTTCAGGACTAGATGCGCGGTCTGCAGCCATTGTAATGAGAACAGTGAGAAACATTGTCGACACTGGAAGAA
CAATCGTCTGCACCATCCATCAGCCTAGTATAGATATCTTTGAATCATTTGACGAGCTTTTGCTCATGAAAAGAGGTGGACAGCTCATTTATGCT
GGTTCACTAGGGAACAGATCATGCAAACTTATTCAGTATTTTGAGGAAATTCAAGGAGTTCACAGAATTAGGTCTGGACAGAACCCTGCTGCTTG
GGTTCTTGAAGTTACTTCTTCAGCAGAAGAAAATCGCCTCGGTGTAGATTTTGCTGACATTTATCGAAAATCGACTTTATTCCAGCAAAATGAGG
AAATGGTTGAAAG
AATAGTTTTTATGGATGAACCTACTTCAGGACTAGATGCGCGGTCTGCAGCCATTGTAATGAGAACAGTGAGAAACATTGTCGACACTGGAAGAA
CAATCGTCTGCACCATCCATCAGCCTAGTATAGATATCTTTGAATCATTTGACGAGCTTTTGCTCATGAAAAGAGGTGGACAGCTCATTTATGCT
GGTTCACTAGGGAACAGATCATGCAAACTTATTCAGTATTTTGAGGAAATTCAAGGAGTTCACAGAATTAGGTCTGGACAGAACCCTGCTGCTTG
GGTTCTTGAAGTTACTTCTTCAGCAGAAGAAAATCGCCTCGGTGTAGATTTTGCTGACATTTATCGAAAATCGACTTTATTCCAGCAAAATGAGG
AAATGGTTGAAAG
Unigenes |
Current Unigene builds | |||||
[SGN-E356452] | SGN-U601025 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T171462 [Download] [View] | Facility Assigned ID: THTCZ57TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.969 | Expected Error Rate: 0.0094 | Quality Trim Threshold: 14.5 |