EST details — SGN-E357163
| Search information |
| Request: 357163 | Match: SGN-E357163 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C101327 | Clone name: cLHT-17-N11 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193841 [TUS-69-E7] | Trace: SGN-T346959 | EST: SGN-E546084 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193841 [TUS-69-E7] | Trace: SGN-T350188 | EST: SGN-E549313 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E357163 | Length: 514 bp (842 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E357163 [] (trimmed)
AAAAACAAGAAGGTGGAGATACTGGAGGCGTGAACTCTAATCTGTATCCTACGGGGCTAAAAAATGGCAGGTGAACCAGTTGATGTGAATGAATT
TGAAGAGCTAGCTAGGCAAGTTCTTCCAAAGATATCCTATGACTTCTTTTCTGGAGGAGCTGAGGACCAGCACACACTCAAAGAAAATATTGAAG
CATTTCATAGAATCATAATCCAGCCAAGAATACTTGTTGATGTGAGCAGAATAGACATGTCAACTGTTATACTCAGTCACAAGACGTCAGCTCCT
ATAATGATTGCCCCAACTATGATGCACAAATTTGCACACCCTGAAGGTTGTACTAAATCAATTACTCCATTCATTTCAATTTGTTTGTGTGGTTT
TGACTTGACACAACATTTAAGAAAGTAAAGAAGATTTTTGTGTCTTATTATCTTAAACTAAAGATATGTAGAATGTACCAAAAGATGTTTAACCT
TGTGCTTTTAAACATGTCACGTGCAAAGATAGACTTAAA
TGAAGAGCTAGCTAGGCAAGTTCTTCCAAAGATATCCTATGACTTCTTTTCTGGAGGAGCTGAGGACCAGCACACACTCAAAGAAAATATTGAAG
CATTTCATAGAATCATAATCCAGCCAAGAATACTTGTTGATGTGAGCAGAATAGACATGTCAACTGTTATACTCAGTCACAAGACGTCAGCTCCT
ATAATGATTGCCCCAACTATGATGCACAAATTTGCACACCCTGAAGGTTGTACTAAATCAATTACTCCATTCATTTCAATTTGTTTGTGTGGTTT
TGACTTGACACAACATTTAAGAAAGTAAAGAAGATTTTTGTGTCTTATTATCTTAAACTAAAGATATGTAGAATGTACCAAAAGATGTTTAACCT
TGTGCTTTTAAACATGTCACGTGCAAAGATAGACTTAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E357163] | SGN-U573112 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T170828 [Download] [View] | Facility Assigned ID: THTCO78TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |
Working
